ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.4.1

Subclass Accession number: 454
Subclass: 8.4.1

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>75 %)  3.4 (>75 %)  3.4.21 (>75 %)
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  GO:0016829 (>50 %)  GO:0016846 (>50 %)
SCOP : 50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  53382 (>75 %)  53383 (>75 %)  53402 (>50 %)

Number of loops: 3

Average sequence ID (%) : 21.0 +/- 16.4
Average RMSD (Å) : 0.633 +/- 0.208

Consensus geometry

d (Å): 17

delta (°): 135-180

theta (°): 90-135

rho (°): 0-45

Consensus Sequence:	pppXXIpXpXhh
(φψ)-conformation:	aalbpbpaaabb

Pattern:	[DEY]	[E]	[FLY]	x	[AEK]	[AGT]	[IV]	[AK]	[HK]	[RW]	[FIM]	[GKS]	[DET]	[QR]	[HY]	[KQY]	[KTW]	[AD]	[I]	[DQS]	[PST]	[DQ]	[QTW]	[IV]	[IV]	x	[GT]
Conservation:	-0.796	2.114	-0.003	-0.973	-0.796	-0.884	0.957	-0.398	0.228	1.282	-0.355	-0.884	-0.444	0.650	2.247	-0.708	-1.061	-0.225	1.320	-0.532	-0.620	0.609	-0.884	0.957	0.957	-1.414	-0.344

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1c7n_A_69	1c7n	A	69	95	EEYKKTVKKWMKDRHQWDIQTDWIINT	HHHHHHHHHHHHHHH-----GGGEEEE	aaaaaaaaaaaaaaalbxbbaaaxbxb
1d2f_A_67	1d2f	A	67	93	DEFLAAIAHWFSTQHYTAIDSQTVVYG	HHHHHHHHHHHHHHS-----GGGEEEE	aaaaaaaaaaaaaaalbxbxaaaxbbb
1o4s_A_69	1o4s	A	69	95	YELREGIAKRIGERYKKDISPDQVVVT	HHHHHHHHHHHHHHHT----GGGEEEE	aaaaaaaaaaaaaaalbxbxaaabbxb

Clusters included in this Subclass