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Information on SUBCLASS 3.1.14
Subclass Accession number: 4660
Subclass: 3.1.14 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 7.1 +/- 8.1
Average RMSD (Å) : 1.000 +/- 0.082

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhchhXp
(φψ)-conformation: aalppaa
Pattern: xx[ILV]xxxx[AL]xxxx[AKM][GPT]x[ENP]xxx[AKN][ILM]xxxxxx[EKY][FIV]x[CDGN]x[LTV]
Conservation:-0.746-0.8852.098-1.302-0.746-1.4410.8200.8530.018-1.2320.2271.4050.2750.727-0.0510.893-0.6070.222-0.5380.2252.248-0.2600.088-1.302-0.746-0.815-0.8850.8211.692-0.746-0.190-1.0240.903
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1efu_B_1871efu   B194226YQVQLDIAMQSGKPKEIAEKMVEGRMKKFTGEVHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHaaaaaaaaaaavpxaaaaaaaaaaaaaaaaaaa
1f5q_B_1491f5q   B150182TDLICYILHIMHAPREDYLNIYNLCRPKIFCALHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHaaaaaaaaaaalxxaaaaaaaaaaaaaaaaaaa
1m66_A_2001m66   A213245LAIGSGVANGLGMGLNARAALIMRGLLEIRDLTHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHaaaaaaaaaaavxbaaaaaaaaaaaaaaaaaaa
1puo_A_221puo   A2254ELLLDLSLTKVNATEPERTAMKKIQDCYVENGLHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHaaaaaaaaaaalxxaaaaaaaaaaaaaaaaaea
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m66_A_2001m66   A     PLMPALMITIC ACID G - 216
1m66_A_2001m66   A     PLMPALMITIC ACID S - 217
1m66_A_2001m66   A     PLMPALMITIC ACID V - 219
1m66_A_2001m66   A     PLMPALMITIC ACID A - 220
1m66_A_2001m66   A     PLMPALMITIC ACID L - 223
1m66_A_2001m66   A     PLMPALMITIC ACID M - 225
1m66_A_2001m66   A     PLMPALMITIC ACID A - 229
1m66_A_2001m66   A     PLMPALMITIC ACID R - 230
1m66_A_2001m66   A     PLMPALMITIC ACID A - 232
1m66_A_2001m66   A     PLMPALMITIC ACID L - 233
1m66_A_2001m66   A     PLMPALMITIC ACID R - 236
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL M - 42
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL I - 45
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL Y - 49
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL R - 57
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL V - 58
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL D - 60
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL G - 61
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL L - 62
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL M - 64
1puo_A_221puo   A     MPD2-METHYL-2,4-PENTANEDIOL T - 65

Clusters included in this Subclass
CLUSTER: HH.4.226