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Information on SUBCLASS 3.10.4
Subclass Accession number: 4737
Subclass: 3.10.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004592 (>75 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  GO:0016881 (>75 %)  
SCOP : 52373 (>75 %)  52374 (>75 %)  63976 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 69.6 +/- 0.0
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: AXRPGHF
(φψ)-conformation: aabpgaa
Pattern: [E][G][A][SV][R][P][G][H][F][QR][G][V][AS][T][IV][V][AS][KR][L][F]x[L][V]
Conservation:0.3450.912-0.222-1.9220.3451.4790.9122.0450.912-0.7890.912-0.222-1.0720.345-0.505-0.222-1.072-0.505-0.2220.912-1.922-0.222-0.222
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1iho_A_1191iho   A119141EGASRPGHFRGVSTIVSKLFNLVHHHHSTTHHHHHHHHHHHHHHHHaaaabxgaaaaaaaaaaaaaaaa
1v8f_A_1131v8f   A113135EGAVRPGHFQGVATVVARLFLLVHHHHSTTHHHHHHHHHHHHHHHHaaaabpvaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iho_A_1191iho   A     EDO1,2-ETHANEDIOL G - 129
1iho_A_1191iho   A     EDO1,2-ETHANEDIOL V - 130
1iho_A_1191iho   A     EDO1,2-ETHANEDIOL I - 133
1iho_A_1191iho   A     EDO1,2-ETHANEDIOL V - 134
1iho_A_1191iho   A     EDO1,2-ETHANEDIOL L - 137
1v8f_A_1131v8f   A     GOLGLYCEROL E - 113
1v8f_A_1131v8f   A     GOLGLYCEROL G - 114
1v8f_A_1131v8f   A     GOLGLYCEROL A - 115
1v8f_A_1131v8f   A     GOLGLYCEROL V - 116
1v8f_A_1131v8f   A     GOLGLYCEROL R - 117
1v8f_A_1131v8f   A     GOLGLYCEROL P - 118
1v8f_A_1131v8f   A     GOLGLYCEROL G - 119
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM H - 120
1v8f_A_1131v8f   A     GOLGLYCEROL H - 120
1v8f_A_1131v8f   A     GOLGLYCEROL F - 121
1v8f_A_1131v8f   A     GOLGLYCEROL Q - 122
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM G - 123
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM V - 124
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM V - 127
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM V - 128
1v8f_A_1131v8f   A     144TRIS-HYDROXYMETHYL-METHYL-AMMONIUM L - 131

Clusters included in this Subclass
CLUSTER: HH.2.221