Logo
Information on SUBCLASS 4.1.5
Subclass Accession number: 4774
Subclass: 4.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 14.9 +/- 20.0
Average RMSD (Å) : 1.033 +/- 0.404

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hcGphXXp
(φψ)-conformation: aalabpaa
Pattern: [LPV][ADE]x[TW]x[GW]x[VW][AF][DGK][G][ERS][FI][PT][AK][DEK][ENQ][VWY]x[GKQ][EKY][VW][IW][AES]xxx[EGK][GIY]
Conservation:-0.873-0.365-0.7881.652-0.6111.758-0.449-0.1710.045-0.7043.109-0.4490.3700.9790.1020.2280.2280.059-0.873-0.619-0.5341.1901.190-0.365-0.280-0.788-1.043-0.619-1.381
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1o8a_A_4571o8a   A464492VDQWRWRVFDGSITKENYNQEWWSLRLKYHHHHHHHHHTTSS-TTTHHHHHHHHHHHHaaaaaaaaaavabxaaaaaaaaaaaaaaa
1r42_A_4491r42   A456484LEKWRWMVFKGEIPKDQWMKKWWEMKREIHHHHHHHHHHT-S-GGGHHHHHHHHHHHHaaaaaaaaaavabwaaaaaaaaaaaaaaa
1rc2_A_641rc2   A6492PAVTIGLWAGGRFPAKEVVGYVIAQVVGGHHHHHHHHHTT-S-TTTHHHHHHHHHHHHaaaaaaaaaavabxaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o8a_A_4571o8a   A     NXAN-CARBOXYALANINE F - 457
1o8a_A_4571o8a   A     NXAN-CARBOXYALANINE F - 460
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o8a_A_4571o8a   A CL1CL BINDING SITE FOR CHAIN AW - 485
1o8a_A_4571o8a   A CL1CL BINDING SITE FOR CHAIN AW - 486
1o8a_A_4571o8a   A CL1CL BINDING SITE FOR CHAIN AR - 489

Clusters included in this Subclass
CLUSTER: HH.8.88