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PDB code:

Information on SUBCLASS 4.6.4

Subclass Accession number: 4792 Subclass: 4.6.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 3 Average sequence ID (%) : 11.1 +/- 12.7 Average RMSD (Å) : 1.267 +/- 0.153 Consensus geometry d (Å): 15 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ngk_A_71	1ngk	A	71	91	LRMRHAPFRISLIERDAWLRC	HHHHHTTS---HHHHHHHHHH	aaaaaaabxbxaaaaaaaaaa
1ojr_A_145	1ojr	A	147	167	LIALTYVLENDTAVFTRQLWE	HHHHTTTS-S-HHHHHHHHHH	aaaaaaaxpxbaaaaaaaaaa
1q8c_A_14	1q8c	A	25	45	IFSLLFFLPKEAEVIQADFLE	HHHHGGG----HHHHHHHHHH	aaaaaaaxwbxaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 71
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	R - 74
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	H - 75
1ngk_A_71	1ngk	A	CNCYANIDE GROUP	H - 75
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	F - 78
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	I - 80
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	E - 84
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	R - 85
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	W - 88
1ngk_A_71	1ngk	A	CNCYANIDE GROUP	W - 88
1ngk_A_71	1ngk	A	HEMPROTOPORPHYRIN IX CONTAINING FE	L - 89
1ojr_A_145	1ojr	A	GOLGLYCEROL	V - 153
1ojr_A_145	1ojr	A	GOLGLYCEROL	L - 154
1ojr_A_145	1ojr	A	GOLGLYCEROL	Q - 164
1q8c_A_14	1q8c	A	IODIODIDE ION	R - 14
1q8c_A_14	1q8c	A	IODIODIDE ION	R - 17
1q8c_A_14	1q8c	A	IODIODIDE ION	L - 32
1q8c_A_14	1q8c	A	IODIODIDE ION	P - 33
1q8c_A_14	1q8c	A	IODIODIDE ION	K - 34

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1ojr_A_145	1ojr	A	GO4GOL BINDING SITE FOR CHAIN A	L - 154

Clusters included in this Subclass

CLUSTER: HH.6.218

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