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Information on SUBCLASS 4.9.4
Subclass Accession number: 4803
Subclass: 4.9.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 21.6 +/- 18.6
Average RMSD (Å) : 1.100 +/- 0.346

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XphGhpXp
(φψ)-conformation: aaplppaa
Pattern: [DE][IV][AGL]x[AE][QST][AL][G][AGV][DES]x[EST][E]xxxx
Conservation:1.0750.954-0.891-0.211-0.052-0.227-0.1652.429-0.6260.105-1.024-0.2271.831-0.626-0.825-0.626-0.891
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cyo_*_441cyo   -4460EVLREQAGGDATENFEDHHHHHHTTSB-HHHHHHaaaaaaxvbxaaaaaaa
1nth_A_3801nth   A388404EVARATAGVEISEVNVIHHHHHHTT--HHHHHHHaaaaaapvxpaaaaaaa
1toh_*_3431toh   -351367DIGLASLGASDEEIEKLHHHHHHTT--HHHHHHHaaaaaapvxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 45
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 46
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 49
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 54
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE N - 57
1cyo_*_441cyo   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 58
1toh_*_3431toh   *     FEFE (III) ION Y - 371

Clusters included in this Subclass
CLUSTER: HH.4.252