Information on SUBCLASS 4.36.1 |
Subclass Accession number: 4847
Subclass: 4.36.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 18.8 +/- 17.3 Average RMSD (Å) : 0.675 +/- 0.350 Consensus geometry
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Consensus Sequence: | XhhhGDhc |
(φψ)-conformation: | aabplpaa |
Pattern: | x | [ALV] | [ADE] | [AKMT] | [ALTV] | [AFLW] | [AP] | [G] | [DQ] | x | [DEGK] | x | x | [AKR] | x | [LM] |
Conservation: | -0.423 | -0.078 | 0.041 | -0.693 | -0.462 | -0.616 | 1.100 | 2.666 | 1.152 | -0.809 | -0.423 | -1.080 | -1.041 | -0.195 | -0.119 | 0.980 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8i_*_397 | 1a8i | - | 413 | 428 | RVAAAFPGDVDRLRRM | HHHHHSTT-HHHHHHH | aaaaabxvxaaaaaaa |
1l5w_A_365 | 1l5w | A | 381 | 396 | LVEKTWPGDEKVWAKL | HHHHHSTT-HHHHHHH | aaaaabpvxaaaaaaa |
2hgs_A_316 | 2hgs | A | 316 | 331 | MLEMLLPGQPEAVARL | HHHHHSTT-HHHHHHH | aaaaabxvbaaaaaaa |
2lhb_*_116 | 2lhb | - | 123 | 138 | IADTVAAGDAGFEKLM | HHHHHHTT-HHHHHHH | aaaaabpvxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 116 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | K - 117 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 118 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 119 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 120 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 123 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 138 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | I - 141 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | C - 142 |
2lhb_*_116 | 2lhb | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 145 |
Clusters included in this Subclass |
CLUSTER: HH.3.176 |