Information on SUBCLASS 4.41.1 |
Subclass Accession number: 4852
Subclass: 4.41.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.7 +/- 15.7 Average RMSD (Å) : 0.833 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXXPXXXp |
(φψ)-conformation: | aapwppaa |
Pattern: | [PV] | [KL] | [AGR] | [FY] | [LT] | x | x | [FMQ] | [P] | x | [DPT] | [ADP] | [ER] | x | [EKQ] | x | x |
Conservation: | -0.129 | -0.288 | -0.511 | 1.731 | -0.003 | -0.711 | -0.511 | -0.445 | 3.076 | -0.644 | -0.312 | -0.511 | 0.508 | -0.511 | 0.419 | -0.777 | -0.378 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gxm_A_536 | 1gxm | A | 539 | 555 | VLAFLMTQPQTAEIEQA | HHHHHTTS---HHHHHH | aaaaaaaxpxxaaaaaa |
1kwg_A_267 | 1kwg | A | 267 | 283 | PLGFTDLMPLPPEEKLR | HHHHHHHS---HHHHHH | aaaaaaaxwxxaaaaaa |
1ufi_A_9 | 1ufi | A | 19 | 35 | VKRYLTSFPIDDRVQSH | HHHHHTTS---HHHHHH | aaaaaaabwbxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kwg_A_267 | 1kwg | A | MPD2-METHYL-2,4-PENTANEDIOL | F - 270 |
1kwg_A_267 | 1kwg | A | MPD2-METHYL-2,4-PENTANEDIOL | L - 273 |
1kwg_A_267 | 1kwg | A | MPD2-METHYL-2,4-PENTANEDIOL | M - 274 |
1kwg_A_267 | 1kwg | A | MPD2-METHYL-2,4-PENTANEDIOL | P - 275 |
Clusters included in this Subclass |
CLUSTER: HH.5.357 |