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Information on SUBCLASS 4.41.1
Subclass Accession number: 4852
Subclass: 4.41.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.7 +/- 15.7
Average RMSD (Å) : 0.833 +/- 0.153

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXPXXXp
(φψ)-conformation: aapwppaa
Pattern: [PV][KL][AGR][FY][LT]xx[FMQ][P]x[DPT][ADP][ER]x[EKQ]xx
Conservation:-0.129-0.288-0.5111.731-0.003-0.711-0.511-0.4453.076-0.644-0.312-0.5110.508-0.5110.419-0.777-0.378
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gxm_A_5361gxm   A539555VLAFLMTQPQTAEIEQAHHHHHTTS---HHHHHHaaaaaaaxpxxaaaaaa
1kwg_A_2671kwg   A267283PLGFTDLMPLPPEEKLRHHHHHHHS---HHHHHHaaaaaaaxwxxaaaaaa
1ufi_A_91ufi   A1935VKRYLTSFPIDDRVQSHHHHHHTTS---HHHHHHaaaaaaabwbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kwg_A_2671kwg   A     MPD2-METHYL-2,4-PENTANEDIOL F - 270
1kwg_A_2671kwg   A     MPD2-METHYL-2,4-PENTANEDIOL L - 273
1kwg_A_2671kwg   A     MPD2-METHYL-2,4-PENTANEDIOL M - 274
1kwg_A_2671kwg   A     MPD2-METHYL-2,4-PENTANEDIOL P - 275

Clusters included in this Subclass
CLUSTER: HH.5.357