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Information on SUBCLASS 5.1.4
Subclass Accession number: 4872
Subclass: 5.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 11.4 +/- 15.2
Average RMSD (Å) : 0.817 +/- 0.160

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hhcXXhXXX
(φψ)-conformation: aalbpppaa
Pattern: [ilpv]xx[ACFKLM][ailm][GKN][GKQS][APQT][AILPTV][DNP][AEQT][aekn][alv]x[DEKRY][dek]x
Conservation:-0.510-0.648-1.161-0.757-0.2202.3300.5180.541-0.3272.0650.701-0.927-0.033-0.7870.0270.181-0.992
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aw9_*_1201aw9   -120136VRPLLGGAPDAAVVDKHHHHHTT----HHHHHHHaaaaavbxpxaaaaaaa
1axd_A_1191axd   A119135ISPMLGGTTDQKVVDENHHHHHT----HHHHHHHaaaaagbbxxaaaaaaa
1e3d_B_771e3d   B86102LEDAINKPIPANATYIRHHHHH-----HHHHHHHaaaaalbwbpaaaaaaa
1hss_A_201hss   A2541RLQCNGSQVPEAVLRDCHHHTTT----HHHHHHHaaaaavxxbxaaaaaaa
1jlv_A_1041jlv   A114130PQIFAKQPANAENEKKMHHHTT-----HHHHHHHaaaaalxwxbaaaaaaa
1nst_A_8421nst   A862878LLYKMGQTLPTWLREDLHHHHHT----HHHHHHHaaaaavxxxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aw9_*_1201aw9   *     CDCADMIUM ION E - 138
1aw9_*_1201aw9   *     CDCADMIUM ION K - 142
1aw9_*_1201aw9   *     CDCADMIUM ION H - 150
1aw9_*_1201aw9   *     CDCADMIUM ION L - 151
1aw9_*_1201aw9   *     CDCADMIUM ION A - 152
1aw9_*_1201aw9   *     CDCADMIUM ION R - 153
1e3d_B_771e3d   B     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) T - 77
1e3d_B_771e3d   B     H2SHYDROSULFURIC ACID T - 77
1e3d_B_771e3d   B     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) H - 78
1e3d_B_771e3d   B     H2SHYDROSULFURIC ACID L - 106
1e3d_B_771e3d   B     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) Q - 109
1e3d_B_771e3d   B     H2SHYDROSULFURIC ACID Q - 109
1e3d_B_771e3d   B     H2SHYDROSULFURIC ACID F - 110
1e3d_B_771e3d   B     FNE(MU-SULPHIDO)-BIS(MU-CYS,S)-[TRICARBONYLIRON-DI-(CYS, S)NICKEL(II)](FE-NI) D - 113
1e3d_B_771e3d   B     H2SHYDROSULFURIC ACID D - 113
1jlv_A_1041jlv   A     GSHGLUTHATHIONE Y - 105
1jlv_A_1041jlv   A     GSHGLUTHATHIONE Y - 113

Clusters included in this Subclass
CLUSTER: HH.6.41