Information on SUBCLASS 5.31.1 |
Subclass Accession number: 4923
Subclass: 5.31.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.7 +/- 21.9 Average RMSD (Å) : 0.900 +/- 0.346 Consensus geometry
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Consensus Sequence: | XpGhhXcXX |
(φψ)-conformation: | aagbppbaa |
Pattern: | [EGR] | [DEG] | [ITV] | [AIT] | [EQR] | [AIY] | [IL] | x | [KT] | [CLV] | [AGL] | x | x | [ER] | [G] | [IVY] | [AIL] | [FLT] | [DN] | [HP] | [SV] | [AY] | [DET] | [FG] | [EK] | [AST] | [FMV] | [QRY] | [GM] | [IL] | [IKV] | [ADE] | [KL] | [AIL] |
Conservation: | -0.884 | -0.168 | 0.037 | -0.782 | 0.446 | -0.987 | 1.115 | -0.695 | 0.442 | -0.168 | -1.294 | -1.294 | -0.884 | 0.736 | 3.823 | 0.037 | -0.475 | -0.782 | 1.657 | 0.977 | -0.618 | 0.450 | -0.066 | -0.076 | 1.169 | 0.037 | -0.168 | -0.373 | -0.207 | 1.115 | -0.782 | -0.373 | -0.486 | -0.475 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f2d_A_274 | 1f2d | A | 274 | 307 | EGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALI | HHHHHHHHHHHHHHS----TTTHHHHHHHHHHHH | aaaaaaaaaaaaaavxxbbaaaaaaaaaaaaaaa |
1j0a_A_261 | 1j0a | A | 261 | 294 | GEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLA | HHHHHHHHHHHHHHS----TTTHHHHHHHHHHHH | aaaaaaaaaaaaaavbxxbaaaaaaaaaaaaaaa |
1k8k_B_186 | 1k8k | B | 187 | 220 | RDITRYLIKLLLLRGYAFNHSADFETVRMIKEKL | HHHHHHHHHHHHHTT----TTTTHHHHHHHHHHH | aaaaaaaaaaaaaagbxxxaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f2d_A_274 | 1f2d | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 292 |
1f2d_A_274 | 1f2d | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 295 |
1f2d_A_274 | 1f2d | A | PLPPYRIDOXAL-5'-PHOSPHATE | E - 296 |
1j0a_A_261 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | D - 279 |
1j0a_A_261 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 282 |
1j0a_A_261 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 283 |
Clusters included in this Subclass |
CLUSTER: HH.9.34 |