Information on SUBCLASS 6.11.2 |
Subclass Accession number: 4952
Subclass: 6.11.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 6.4 +/- 8.8 Average RMSD (Å) : 0.950 +/- 0.129 Consensus geometry
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Consensus Sequence: | pXcXpXppXh |
(φψ)-conformation: | aalppaapaa |
Pattern: | [CFL] | x | x | x | [AIVY] | x | x | x | [CIMV] | x | [EKR] | x | [GK] | x | [DEPS] | x | [HKST] | x | [EGK] | x | [HKRY] | x | x | x | x | x |
Conservation: | 1.028 | -0.482 | -0.577 | -0.225 | 0.281 | 0.284 | -0.863 | -1.626 | 1.331 | -0.195 | 2.445 | -1.149 | 1.514 | -0.291 | 0.758 | 0.537 | 0.186 | -0.021 | 0.976 | -0.354 | 1.044 | -0.958 | -0.672 | -0.386 | -0.863 | -1.721 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fc3_A_141 | 1fc3 | A | 145 | 170 | LDASITSIIHEIGVPAHIKGYLYLRE | HHHHHHHHHHHHT--TTSHHHHHHHH | aaaaaaaaaaaagxxaaxaaaaaaaa |
1h21_A_147 | 1h21 | A | 147 | 172 | CHISVSKWCYENKIEATSKQRSERCG | HHHHHHHHHHHHT--TTSHHHHHHHH | aaaaaaaaaaaalbxaapaaaaaaaa |
1jdp_A_311 | 1jdp | A | 322 | 347 | LYVLALHEVLRAGYSKKDGGKIIQQT | HHHHHHHHHHHTT--TT-HHHHHHHH | aaaaaaaaaaaavbbaaxaaaaaaaa |
1po5_A_264 | 1po5 | A | 264 | 289 | FIDVYLLRMEKDKSDPSSEFHHQNLI | HHHHHHHHHHHHT--TT-HHHHHHHH | aaaaaaaaaaaavxpaapaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h21_A_147 | 1h21 | A | HECHEME C | H - 148 |
1h21_A_147 | 1h21 | A | HECHEME C | I - 149 |
1h21_A_147 | 1h21 | A | HECHEME C | S - 152 |
1h21_A_147 | 1h21 | A | HECHEME C | K - 153 |
1h21_A_147 | 1h21 | A | HECHEME C | Y - 156 |
1h21_A_147 | 1h21 | A | HECHEME C | E - 157 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | S - 294 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 295 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 296 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 298 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | G - 299 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 300 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 302 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 303 |
1po5_A_264 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | T - 306 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h21_A_147 | 1h21 | A | AC4HEC BINDING SITE FOR CHAIN B | H - 148 |
1h21_A_147 | 1h21 | A | AC4HEC BINDING SITE FOR CHAIN B | I - 149 |
1h21_A_147 | 1h21 | A | AC4HEC BINDING SITE FOR CHAIN B | S - 152 |
1h21_A_147 | 1h21 | A | AC4HEC BINDING SITE FOR CHAIN B | K - 153 |
1h21_A_147 | 1h21 | A | AC3HEC BINDING SITE FOR CHAIN B | Y - 156 |
Clusters included in this Subclass |
CLUSTER: HH.5.224 |
CLUSTER: HH.6.238 |