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Information on SUBCLASS 6.11.2
Subclass Accession number: 4952
Subclass: 6.11.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 6.4 +/- 8.8
Average RMSD (Å) : 0.950 +/- 0.129

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXcXpXppXh
(φψ)-conformation: aalppaapaa
Pattern: [CFL]xxx[AIVY]xxx[CIMV]x[EKR]x[GK]x[DEPS]x[HKST]x[EGK]x[HKRY]xxxxx
Conservation:1.028-0.482-0.577-0.2250.2810.284-0.863-1.6261.331-0.1952.445-1.1491.514-0.2910.7580.5370.186-0.0210.976-0.3541.044-0.958-0.672-0.386-0.863-1.721
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fc3_A_1411fc3   A145170LDASITSIIHEIGVPAHIKGYLYLREHHHHHHHHHHHHT--TTSHHHHHHHHaaaaaaaaaaaagxxaaxaaaaaaaa
1h21_A_1471h21   A147172CHISVSKWCYENKIEATSKQRSERCGHHHHHHHHHHHHT--TTSHHHHHHHHaaaaaaaaaaaalbxaapaaaaaaaa
1jdp_A_3111jdp   A322347LYVLALHEVLRAGYSKKDGGKIIQQTHHHHHHHHHHHTT--TT-HHHHHHHHaaaaaaaaaaaavbbaaxaaaaaaaa
1po5_A_2641po5   A264289FIDVYLLRMEKDKSDPSSEFHHQNLIHHHHHHHHHHHHT--TT-HHHHHHHHaaaaaaaaaaaavxpaapaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1h21_A_1471h21   A     HECHEME C H - 148
1h21_A_1471h21   A     HECHEME C I - 149
1h21_A_1471h21   A     HECHEME C S - 152
1h21_A_1471h21   A     HECHEME C K - 153
1h21_A_1471h21   A     HECHEME C Y - 156
1h21_A_1471h21   A     HECHEME C E - 157
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 294
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 295
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 296
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 298
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 299
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 300
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 302
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 303
1po5_A_2641po5   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 306
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h21_A_1471h21   A AC4HEC BINDING SITE FOR CHAIN BH - 148
1h21_A_1471h21   A AC4HEC BINDING SITE FOR CHAIN BI - 149
1h21_A_1471h21   A AC4HEC BINDING SITE FOR CHAIN BS - 152
1h21_A_1471h21   A AC4HEC BINDING SITE FOR CHAIN BK - 153
1h21_A_1471h21   A AC3HEC BINDING SITE FOR CHAIN BY - 156

Clusters included in this Subclass
CLUSTER: HH.5.224
CLUSTER: HH.6.238