Logo
Information on SUBCLASS 6.16.2
Subclass Accession number: 4958
Subclass: 6.16.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008233 (>50 %)  GO:0008234 (>50 %)  
SCOP : 54000 (>50 %)  54001 (>50 %)  54002 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 23.6 +/- 26.7
Average RMSD (Å) : 0.833 +/- 0.321

Consensus geometry
d (Å): 17 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXcXcXhpXp
(φψ)-conformation: aalbaapbaa
Pattern: x[AY]x[FY][RST][AM]x[AK][AL][L][AN][AE][ET]x[GN][IT][DN][GKT][VY][DHN][AR][EHQ]xx
Conservation:-0.969-0.3340.4452.496-0.572-0.024-0.870-0.196-0.3411.806-0.137-0.1960.121-1.3651.013-0.0241.596-1.1670.6100.419-0.1960.419-1.564-0.969
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cv8_*_241cv8   -2447CAGYTMSALLNATYNTNKYHAEAVHHHHHHHHHHHHHHT-----HHHHaaaaaaaaaaaaaalbaaxbaaaa
1o08_A_10161o08   A10181041EYHFRAWKALAEEIGINGVDRQFNHHHHHHHHHHHHHTT-----HHHHaaaaaaaaaaaaaavbaaxbaaaa
1pxv_A_2431pxv   A243266AAGFSMAALLNATKNTDTYNAHDIHHHHHHHHHHHHHHT-S---HHHHaaaaaaaaaaaaaalbaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cv8_*_241cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE C - 24
1cv8_*_241cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE A - 25
1cv8_*_241cv8   *     ACTACETATE ION T - 39
1cv8_*_241cv8   *     ACTACETATE ION N - 40
1o08_A_10161o08   A     G16ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE A - 1017
1o08_A_10161o08   A     MGMAGNESIUM ION A - 1017
1o08_A_10161o08   A     G16ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE H - 1020
1o08_A_10161o08   A     G16ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE F - 1021
1o08_A_10161o08   A     G16ALPHA-D-GLUCOSE 1,6-BISPHOSPHATE W - 1024
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cv8_*_241cv8   * NULCATALYTIC TRIAD.C - 24

Clusters included in this Subclass
CLUSTER: HH.6.176