Information on SUBCLASS 6.25.1 |
Subclass Accession number: 4968
Subclass: 6.25.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 48.6 +/- 22.9 Average RMSD (Å) : 0.300 +/- 0.141 Consensus geometry
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Consensus Sequence: | hXphXNXGLX |
(φψ)-conformation: | aapaaapgaa |
Pattern: | [DKPQ] | [AKV] | [E] | [FL] | [AKN] | [DH] | [GPS] | [AS] | [N] | [AN] | [G] | [L] | [dq] | x | [AG] | [FLV] | [KNR] | [FL] | [L] | [EK] | [P] | [IL] | [HK] | [ADEK] |
Conservation: | -0.952 | -1.093 | 1.247 | -0.203 | -1.020 | 0.382 | -0.807 | -0.103 | 1.806 | -0.746 | 1.806 | 0.689 | -1.201 | -0.827 | -0.203 | -0.685 | -0.293 | -0.203 | 0.689 | 0.234 | 2.364 | 0.197 | -0.091 | -0.987 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apx_A_63 | 1apx | A | 63 | 86 | QAELAHGANNGLDIAVRLLEPIKE | HHHHTSGGGTTHHHHHHHHHHHHH | aaaaaxaaapvaaaaaaaaaaaaa |
1iyn_A_59 | 1iyn | A | 59 | 82 | DVELKHGANAGLVNALNLLKPIKD | HHHHTSGGGTTTHHHHHHHHHHHH | aaaaaxaaapvaaaaaaaaaaaaa |
1jdr_A_74 | 1jdr | A | 74 | 97 | KKEFNDPSNAGLQNGFKFLEPIHK | HHHHT-GGGTTTHHHHHHHHHHHH | aaaaaxaaapgaaaaaaaaaaaaa |
1oaf_A_63 | 1oaf | A | 63 | 86 | PAELAHSANNGLDIAVRLLEPLKA | HHHHTSGGGTTHHHHHHHHHHHHH | aaaaapaaapgaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1apx_A_63 | 1apx | A | HEMPROTOPORPHYRIN IX CONTAINING FE | N - 72 |
1iyn_A_59 | 1iyn | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 68 |
1jdr_A_74 | 1jdr | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 83 |
1jdr_A_74 | 1jdr | A | HEMPROTOPORPHYRIN IX CONTAINING FE | G - 84 |
1oaf_A_63 | 1oaf | A | ASCASCORBIC ACID | I - 76 |
1oaf_A_63 | 1oaf | A | ASCASCORBIC ACID | L - 80 |
Clusters included in this Subclass |
CLUSTER: HH.7.90 |