ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.27.1

Subclass Accession number: 4970
Subclass: 6.27.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 36.7 +/- 27.3
Average RMSD (Å) : 0.525 +/- 0.189

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	pXGhpXXpXp
(φψ)-conformation:	aaeaaapbaa

Pattern:	[IV]	[IL]	[DNS]	[AS]	[A]	[LV]	[DE]	[LTV]	[FIL]	[ANS]	[EQ]	x	[G]	[FIY]	[DEH]	[GQ]	x	[QRT]	[LTV]	[ERS]	[KQ]	[IL]	[A]	[EKQ]	x
Conservation:	0.797	0.453	-0.109	0.181	1.178	0.113	0.983	-0.856	-0.407	-0.746	0.885	-1.851	2.767	-0.248	0.035	-0.164	-1.252	-0.880	-0.854	-0.933	0.522	0.416	1.178	0.044	-1.250

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a6i_*_6	1a6i	-	9	33	VINSALELLNEVGIEGLTTRKLAQK	HHHHHHHHHHHHTTTS--HHHHHHH	aaaaaaaaaaaaeaaaxbaaaaaaa
1pb6_A_15	1pb6	A	22	46	ILSAALDTFSQFGFHGTRLEQIAEL	HHHHHHHHHHHH-TTT--HHHHHHH	aaaaaaaaaaaaeaaaxbaaaaaaa
1vi0_A_11	1vi0	A	11	35	IIDAAVEVIAENGYHQSQVSKIAKQ	HHHHHHHHHHHH-GGG--HHHHHHH	aaaaaaaaaaaaeaaabxaaaaaaa
2tct_*_6	2tct	-	9	33	VIDAALELLNETGIDGLTTRKLAQK	HHHHHHHHHHHHTTTS--HHHHHHH	aaaaaaaaaaaaeaaaxbaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass