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Information on SUBCLASS 7.24.1
Subclass Accession number: 5027
Subclass: 7.24.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005509 (>75 %)  
SCOP : 47472 (>75 %)  47473 (>75 %)  63550 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 27.2 +/- 17.7
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hAGpchphpXp
(φψ)-conformation: aaeaalbbpaa
Pattern: [FMV][MRY]x[LTY][F]x[AKQ][FLV][A][G][DQ][DK][GM][EY][LV][DST][AK][ET][DE][L][MQR]x[CIL][LM][ENT][KQ]x
Conservation:-0.428-0.880-1.256-0.9552.507-0.654-0.654-0.5041.1522.5070.5600.185-0.371-0.2040.198-0.428-0.342-0.0320.9721.152-0.428-1.332-0.2780.612-0.5040.588-1.181
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4p_A_31a4p   A1137MMFTFHKFAGDKGYLTKEDLRVLMEKEHHHHHHHHHGGG-SB-HHHHHHHHHHHaaaaaaaaaeaavbbxaaaaaaaaaaa
1alv_A_951alv   A99125FRRLFAQLAGDDMEVSATELMNILNKVHHHHHHHHHGGGTSB-HHHHHHHHHHHaaaaaaaaaeaavbxxaaaaaaaaaaa
1k94_A_541k94   A5480VYTYFSAVAGQDGEVDAEELQRCLTQSHHHHHHHHHGGGTSB-HHHHHHHHHHHaaaaaaaaaeaavbbxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1alv_A_951alv   A     CACALCIUM ION L - 106
1alv_A_951alv   A     CACALCIUM ION A - 107
1alv_A_951alv   A     CACALCIUM ION G - 108
1alv_A_951alv   A     CACALCIUM ION D - 109
1alv_A_951alv   A     CACALCIUM ION D - 110
1alv_A_951alv   A     CACALCIUM ION M - 111
1alv_A_951alv   A     CACALCIUM ION E - 112
1alv_A_951alv   A     CACALCIUM ION V - 113
1alv_A_951alv   A     CACALCIUM ION S - 114
1alv_A_951alv   A     CACALCIUM ION E - 117
1k94_A_541k94   A     CACALCIUM ION V - 61
1k94_A_541k94   A     CACALCIUM ION A - 62
1k94_A_541k94   A     CACALCIUM ION G - 63
1k94_A_541k94   A     CACALCIUM ION Q - 64
1k94_A_541k94   A     CACALCIUM ION D - 65
1k94_A_541k94   A     CACALCIUM ION G - 66
1k94_A_541k94   A     CACALCIUM ION E - 67
1k94_A_541k94   A     CACALCIUM ION V - 68
1k94_A_541k94   A     CACALCIUM ION D - 69
1k94_A_541k94   A     CACALCIUM ION E - 72

Clusters included in this Subclass
CLUSTER: HH.6.164