Information on SUBCLASS 8.22.1 |
Subclass Accession number: 5051
Subclass: 8.22.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005083 (>50 %) GO:0005085 (>50 %) GO:0005515 (>50 %) GO:0008603 (>50 %) GO:0016208 (>50 %) GO:0019207 (>50 %) GO:0019887 (>50 %) GO:0030551 (>50 %) GO:0030552 (>50 %) GO:0030554 (>50 %) GO:0030695 (>50 %) SCOP : 51181 (>50 %) 51206 (>50 %) 51210 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 16.1 +/- 15.1 Average RMSD (Å) : 0.667 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXhpXXpphXXX |
(φψ)-conformation: | aapaaaaabpaa |
Pattern: | [AD] | [ALV] | [DEH] | [AI] | [I] | [FHY] | [DNT] | [EGR] | [L] | [KLT] | x | [ILV] | [EK] | [AN] | [FLT] | [EHS] | [HK] | [FLY] | x | [HPT] | [GNT] | x | [KL] | x | [AEQ] | [IL] | [ACG] | [GLV] | [CLV] |
Conservation: | 0.272 | -0.437 | 0.529 | -0.081 | 2.140 | 1.389 | 0.100 | -0.866 | 2.140 | -1.081 | -1.511 | 0.852 | 1.330 | -0.277 | -0.759 | -0.115 | 0.832 | 0.529 | -1.296 | -0.652 | -0.330 | -1.189 | -0.041 | -0.570 | -0.222 | 1.268 | -0.330 | -1.511 | -0.115 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kq3_A_250 | 1kq3 | A | 250 | 278 | AAHAIHNGLTVLENTHKYLHGEKVAIGVL | HHHHHHHHHTTSGGGTTS-HHHHHHHHHH | aaaaaaaaaaabaaaaaxxaaaaaaaaaa |
1o7f_A_28 | 1o7f | A | 30 | 58 | DVDIIFTRLKGVKAFEKFHPNLLRQICLC | HHHHHHHHHTT-TTTTT--HHHHHHHHHH | aaaaaaaaaaaxaaaaabxaaaaaaaaaa |
1o7f_A_323 | 1o7f | A | 325 | 353 | DLEIIYDELLHIKALSHLSTTVKRELAGV | HHHHHHHHHTT-GGGTTS-HHHHHHHHHH | aaaaaaaaaaaxaaaaabpaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kq3_A_250 | 1kq3 | A | ZNZINC ION | H - 252 |
1kq3_A_250 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | H - 252 |
1kq3_A_250 | 1kq3 | A | ZNZINC ION | H - 269 |
1kq3_A_250 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | H - 269 |
1kq3_A_250 | 1kq3 | A | ZNZINC ION | V - 273 |
1kq3_A_250 | 1kq3 | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | V - 273 |
Clusters included in this Subclass |
CLUSTER: HH.9.74 |