Information on SUBCLASS 35.1.2 |
Subclass Accession number: 5187
Subclass: 35.1.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.8 (>75 %) 2.8.2 (>75 %) 2.8.2.4 GO : GO:0004304 (>50 %) GO:0005496 (>50 %) GO:0008146 (>75 %) GO:0016782 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) 52575 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 65.4 +/- -15.6 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | KcNPXTNYTXhPpEhMcpphSPFMRKGhXGDWKppFXXA |
(φψ)-conformation: | aapaaaalaappaaabpaaabpapaalbbgaaaaappaa |
Pattern: | x | [F] | [KQ] | [E] | [M] | [K] | [KN] | [N] | [P] | x | [T] | [N] | [Y] | [T] | [MT] | [LMV] | [P] | [DEQ] | [E] | [FIM] | [M] | [DN] | [HQ] | [KS] | [ILV] | [S] | [P] | [F] | [M] | [R] | [K] | [G] | [IM] | [AIT] | [G] | [D] | [W] | [K] | [NT] | [HT] | [F] | [PT] | x | [A] | x | [NR] | [E] | [KR] | [F] | [D] | [AEK] | [DH] | [Y] | [AEK] |
Conservation: | -1.000 | 0.831 | -0.633 | 0.340 | 0.340 | 0.340 | -0.726 | 0.831 | 1.323 | -1.269 | 0.340 | 0.831 | 1.323 | 0.340 | -1.099 | -0.971 | 1.323 | -0.807 | 0.340 | -1.190 | 0.340 | -0.384 | -0.580 | -0.974 | -0.807 | -0.152 | 1.323 | 0.831 | 0.340 | 0.340 | 0.340 | 0.831 | -0.783 | -1.627 | 0.831 | 0.831 | 3.289 | 0.340 | -0.726 | -0.912 | 0.831 | -0.924 | -1.503 | -0.152 | -1.512 | -0.695 | 0.340 | -0.374 | 0.831 | 0.831 | -1.463 | -0.570 | 1.323 | -1.463 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aqu_A_229 | 1aqu | A | 230 | 282 | .FQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKNHFPEALRERFDEHYK | .HHHHHH-TTTTTTTS-TTTB-TTTS-SS----S-GGGGT--HHHHHHHHHHHH | .aaaaaaxaaaavaabpaaabxaaabxaxaavbbvaaaaaxxaaaaaaaaaaaa |
1g3m_A_228 | 1g3m | A | 229 | 281 | .FQEMKNNPSTNYTTLPDEIMNQKLSPFMRKGITGDWKNHFTVALNEKFDKHYE | .HHHHHH-TTTS-TTS-TTTB-TTTS-SS----S-GGGGTS-HHHHHHHHHHHH | .aaaaaaxaaaaUaaxxaaabxaaabxaxaavbbgaaaaaxxaaaaaaaaaaaa |
1ls6_A_229 | 1ls6 | A | 230 | 282 | .FKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYA | .HHHHHH-TTTS-TTS-TTTB-TTT--SS----SSGGGGTS-HHHHHHHHHHHH | .aaaaaaxaaaavaaxpabNbbaaabxaxaavbbvaaaaaxxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.34.1 |