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Information on SUBCLASS 0.1.15
Subclass Accession number: 5202
Subclass: 0.1.15 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 12.3 +/- 19.5
Average RMSD (Å) : 0.617 +/- 0.140

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XphX
(φψ)-conformation: aabb
Pattern: xx[ekqr]x[acflmy]xx[afily]xx
Conservation:-0.7970.1571.966-0.159-0.316-0.800-0.9871.274-0.338-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cpt_*_3801cpt   -391400FEELLPKLKSHHHHGGGEEEaaaaaaabab
1dm9_A_781dm9   A7887ASEAALLYEEHHHHGGGEEEaaaaaaabbx
1dp4_A_2671dp4   A270279ARQAFQAAKIHHHHGGGEEEaaaaaaabbb
1dsx_A_621dsx   A6270PKKRMRYFD.HHHHHTTEE.aaaaaaaxb.
1fuq_A_1601fuq   A174183KSRAFADIVKHHHHTTT-EEaaaaaaaxxb
1jdp_A_2641jdp   A267276AKQAYSSLQTHHHHGGGEEEaaaaaaabbb
1o4w_A_621o4w   A7180ALKLLEHFEVHHHHHTTSEEaaaaaaabxb
1p6x_A_2851p6x   A294303LMLKLRNLNVHHHHHTTEEEaaaaaaabxx
1q0s_A_1341q0s   A143152FKQNCDKIIFHHHH-TTEEEaaaaaaabbb
1qdv_A_621qdv   A6270PKKRMRYFD.HHHHGGGEE.aaaaaaaxb.
1t1d_A_951t1d   A95103PQKRNRYYD.HHHHGGGEE.aaaaaaaxb.
1vdk_A_1601vdk   A174183KAQAFDQIVKHHHHTTT-EEaaaaaaaxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 380
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 382
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 383
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE E - 386
1cpt_*_3801cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 387
1o4w_A_621o4w   A     MSESELENOMETHIONINE E - 64
1o4w_A_621o4w   A     MSESELENOMETHIONINE K - 65
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 67
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 68
1o4w_A_621o4w   A     MSESELENOMETHIONINE A - 71

Clusters included in this Subclass
CLUSTER: HE.2.49
CLUSTER: HE.3.110
CLUSTER: HE.4.68