Information on SUBCLASS 0.1.15 |
Subclass Accession number: 5202
Subclass: 0.1.15 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 12.3 +/- 19.5 Average RMSD (Å) : 0.617 +/- 0.140 Consensus geometry
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Consensus Sequence: | XphX |
(φψ)-conformation: | aabb |
Pattern: | x | x | [ekqr] | x | [acflmy] | x | x | [afily] | x | x |
Conservation: | -0.797 | 0.157 | 1.966 | -0.159 | -0.316 | -0.800 | -0.987 | 1.274 | -0.338 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cpt_*_380 | 1cpt | - | 391 | 400 | FEELLPKLKS | HHHHGGGEEE | aaaaaaabab |
1dm9_A_78 | 1dm9 | A | 78 | 87 | ASEAALLYEE | HHHHGGGEEE | aaaaaaabbx |
1dp4_A_267 | 1dp4 | A | 270 | 279 | ARQAFQAAKI | HHHHGGGEEE | aaaaaaabbb |
1dsx_A_62 | 1dsx | A | 62 | 70 | PKKRMRYFD. | HHHHHTTEE. | aaaaaaaxb. |
1fuq_A_160 | 1fuq | A | 174 | 183 | KSRAFADIVK | HHHHTTT-EE | aaaaaaaxxb |
1jdp_A_264 | 1jdp | A | 267 | 276 | AKQAYSSLQT | HHHHGGGEEE | aaaaaaabbb |
1o4w_A_62 | 1o4w | A | 71 | 80 | ALKLLEHFEV | HHHHHTTSEE | aaaaaaabxb |
1p6x_A_285 | 1p6x | A | 294 | 303 | LMLKLRNLNV | HHHHHTTEEE | aaaaaaabxx |
1q0s_A_134 | 1q0s | A | 143 | 152 | FKQNCDKIIF | HHHH-TTEEE | aaaaaaabbb |
1qdv_A_62 | 1qdv | A | 62 | 70 | PKKRMRYFD. | HHHHGGGEE. | aaaaaaaxb. |
1t1d_A_95 | 1t1d | A | 95 | 103 | PQKRNRYYD. | HHHHGGGEE. | aaaaaaaxb. |
1vdk_A_160 | 1vdk | A | 174 | 183 | KAQAFDQIVK | HHHHTTT-EE | aaaaaaaxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 380 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 382 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 383 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 386 |
1cpt_*_380 | 1cpt | * | HEMPROTOPORPHYRIN IX CONTAINING FE | M - 387 |
1o4w_A_62 | 1o4w | A | MSESELENOMETHIONINE | E - 64 |
1o4w_A_62 | 1o4w | A | MSESELENOMETHIONINE | K - 65 |
1o4w_A_62 | 1o4w | A | MSESELENOMETHIONINE | A - 67 |
1o4w_A_62 | 1o4w | A | MSESELENOMETHIONINE | A - 68 |
1o4w_A_62 | 1o4w | A | MSESELENOMETHIONINE | A - 71 |
Clusters included in this Subclass |
CLUSTER: HE.2.49 |
CLUSTER: HE.3.110 |
CLUSTER: HE.4.68 |