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Information on SUBCLASS 0.1.19
Subclass Accession number: 5206
Subclass: 0.1.19 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 15.4 +/- 17.3
Average RMSD (Å) : 0.550 +/- 0.151

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pphX
(φψ)-conformation: aaba
Pattern: xx[AGILTV]xx[afilmtv][agqs]xx[HY]x[DER]x[ilv]x[AGKQRS][AGLMTV][AILTV]x[fhlmv]
Conservation:-0.676-0.279-0.214-0.819-0.672-0.2560.189-0.704-0.5853.285-0.6751.806-0.0480.769-0.7520.128-0.2130.539-0.433-0.390
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e89_A_831e89   A84103LNIAIAADRYVDKIAAGVFHHHHHHHHHHHGGGEEEEEEEaaaaaaaaaaaaababbbbb
1ehy_A_1081ehy   A111130IVLHKFIRKYSDRVIKAAIFHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaababbbbb
1iup_A_1041iup   A107126GLAIATALRYSERVDRMVLMHHHHHHHHHSGGGEEEEEEEaaaaaaaaaaaaabFxbbbb
1j1i_A_1141j1i   A118137ATGLGVSVLHSELVNALVLMHHHHHHHHH-GGGEEEEEEEaaaaaaaaaaaaababbbbb
1mtz_A_1061mtz   A109128ALALAYAVKYQDHLKGLIVSHHHHHHHHHHGGGEEEEEEEaaaaaaaaaaaaababbbbb
1o9g_A_641o9g   A6483YLLTVLGLLHRRSLRQVIASHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaababbbbb
1q0r_A_1031q0r   A106125TITQVIALDHHDRLSSLTMLHHHHHHHHH-GGGEEEEEEEaaaaaaaaaaaaababbbbb
1q5y_A_651q5y   A6988SRIVSTQHHHHDLSVATLHVHHHHHHHHHTGGGEEEEEEEaaaaaaaaaaaaaxabbxbb
1qj4_A_821qj4   A84103LNIAIAADKYCEKIAAAVFHHHHHHHHHHHGGGEEEEEEEaaaaaaaaaaaaababbbxb
1vj5_A_3341vj5   A337356MLVWYMALFYPERVRAVASLHHHHHHHHH-GGGEEEEEEEaaaaaaaaaaaaababbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1iup_A_1041iup   A     ISBISOBUTYRIC ACID F - 104
1iup_A_1041iup   A     ISBISOBUTYRIC ACID G - 105
1o9g_A_641o9g   A     MSESELENOMETHIONINE L - 72
1q0r_A_1031q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) M - 103
1q0r_A_1031q0r   A     AKT10-DECARBOXYMETHYLACLACINOMYCIN T (DCMAT) T - 106
1q5y_A_651q5y   A     EGLETHYLENE GLYCOL R - 65
1q5y_A_651q5y   A     NINICKEL (II) ION V - 72
1q5y_A_651q5y   A     NINICKEL (II) ION H - 76
1q5y_A_651q5y   A     NINICKEL (II) ION H - 87
1q5y_A_651q5y   A     NINICKEL (II) ION V - 88
1q5y_A_651q5y   A     NINICKEL (II) ION H - 89
1qj4_A_821qj4   A     GOLGLYCEROL G - 82
1vj5_A_3341vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA W - 334
1vj5_A_3341vj5   A     CIUN-CYCLOHEXYL-N'-(4-IODOPHENYL)UREA M - 337

Clusters included in this Subclass
CLUSTER: HE.4.47