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Information on SUBCLASS 0.1.58
Subclass Accession number: 5245
Subclass: 0.1.58 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.4 +/- 22.4
Average RMSD (Å) : 0.267 +/- 0.115

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XpXX
(φψ)-conformation: aabb
Pattern: [DPQ][GIV][IL]x[AKM][HS][QR]x[HN]xx[FLV][AGV]
Conservation:-0.272-1.0120.978-1.012-0.8271.0891.107-0.7351.706-0.8600.936-0.272-0.827
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gkl_A_9381gkl   A939951QGIAASRMHRGFGHHHHTTGGGEEEEaaaaaaaaabbbb
1kqo_A_2011kqo   A201213DVLWKHRSNIHVVHHHHHTGGGEEEEaaaaaaaaabbxb
1nup_A_1801nup   A180192PILRMHQHNIHLAHHHHHTGGGEEEEaaaaaaaaabbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gkl_A_9381gkl   A     CDCADMIUM ION A - 943
1gkl_A_9381gkl   A     CDCADMIUM ION S - 944
1gkl_A_9381gkl   A     CDCADMIUM ION M - 946
1gkl_A_9381gkl   A     CDCADMIUM ION H - 947
1gkl_A_9381gkl   A     GOLGLYCEROL F - 953

Clusters included in this Subclass
CLUSTER: HE.4.243
CLUSTER: HE.5.193