Information on SUBCLASS 1.1.5 |
Subclass Accession number: 5271
Subclass: 1.1.5 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 18.2 +/- 21.6 Average RMSD (Å) : 0.444 +/- 0.300 Consensus geometry
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Consensus Sequence: | pXchX |
(φψ)-conformation: | aagbb |
Pattern: | [DEKQR] | [adegr] | x | [FIKLM] | [egknrs] | x | [GKN] | [aflvy] | x |
Conservation: | 1.330 | -1.004 | -0.444 | 0.522 | -0.517 | -1.096 | 1.748 | -0.065 | -0.474 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ako_*_181 | 1ako | - | 188 | 196 | DRLMSWGLV | HHHHHTTEE | aaaaaagbb |
1awd_*_64 | 1awd | - | 64 | 72 | DAQMGKGFV | HHHHHTTEE | aaaaaagxb |
1czp_A_68 | 1czp | A | 68 | 76 | DDQIEAGYV | HHHHHTTEE | aaaaaagxb |
1frr_A_65 | 1frr | A | 65 | 73 | DGQMEEGFV | HHHHHTTEE | aaaaaagxb |
1iue_A_66 | 1iue | A | 66 | 74 | EEQIKKKYI | HHHHHTTEE | aaaaaavxb |
1ju2_A_258 | 1ju2 | A | 264 | 272 | QLLLLSGVG | HHHHHTTEE | aaaaaavbe |
1ne9_A_167 | 1ne9 | A | 174 | 182 | KRPFRDGVE | HHHHHTTEE | aaaaaavxb |
1pb1_A_370 | 1pb1 | A | 381 | 389 | EGAINAKTV | HHHHHTTEE | aaaaaavbb |
1sur_*_136 | 1sur | - | 141 | 149 | RALKELNAQ | HHHHHTTEE | aaaaaalxa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1awd_*_64 | 1awd | * | FESFE2/S2 (INORGANIC) CLUSTER | L - 73 |
1czp_A_68 | 1czp | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 77 |
1frr_A_65 | 1frr | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 74 |
1iue_A_66 | 1iue | A | FESFE2/S2 (INORGANIC) CLUSTER | L - 75 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 258 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 259 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 261 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 262 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 264 |
1ju2_A_258 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 265 |
Clusters included in this Subclass |
CLUSTER: HE.1.43 |
CLUSTER: HE.3.92 |