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Information on SUBCLASS 2.1.9
Subclass Accession number: 5329
Subclass: 2.1.9 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 10.4 +/- 13.7
Average RMSD (Å) : 0.625 +/- 0.234

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XpchpX
(φψ)-conformation: aalpbb
Pattern: [afilm][adkrt][adekqt][ehknrtwy][agn][afilpvwy][efkry]x
Conservation:-0.3070.350-0.348-0.7992.282-0.878-0.158-0.143
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bam_*_581bam   -6976EDTYNWYRHHHH--EEaaaavxbb
1c7q_A_1801c7q   A185192ADQEGYETHHHHT-EEaaaavxxb
1d3v_A_1841d3v   A190197IKTLGIKYHHHHT-EEaaaavxxb
1dci_A_2181dci   A224231LTFTARKMHHHH--EEaaaalxxb
1ixh_*_611ixh   -6471LAQEGLFQHHHHTEEEaaaavbbb
1j3b_A_4031j3b   A414421IRKHAPRVHHHH--EEaaaalxxb
1jx6_A_2101jx6   A224231NRDNNFELHHHH--EEaaaalxbx
1o5i_A_1021o5i   A115122MKEKGWGRHHHHT-EEaaaavbbb
1o89_A_2531o89   A255262FILRNVRLHHHH--EEaaaalxbb
1sqh_A_761sqh   A7683FRTWGTYVHHHH--EEaaaavxbb
1t15_A_16591t15   A16691676ARKHHITLHHHHT-EEaaaalxxb
1uu1_A_1071uu1   A113120AKAVGAKFHHHHT-EEaaaavxxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3v_A_1841d3v   A     ABH2(S)-AMINO-6-BORONOHEXANOIC ACID E - 186
1dci_A_2181dci   A     EDO1,2-ETHANEDIOL R - 218
1dci_A_2181dci   A     EDO1,2-ETHANEDIOL V - 221
1dci_A_2181dci   A     EDO1,2-ETHANEDIOL N - 222
1dci_A_2181dci   A     EDO1,2-ETHANEDIOL F - 226
1j3b_A_4031j3b   A     PO4PHOSPHATE ION E - 412
1j3b_A_4031j3b   A     PO4PHOSPHATE ION K - 413
1j3b_A_4031j3b   A     PO4PHOSPHATE ION K - 416
1j3b_A_4031j3b   A     PO4PHOSPHATE ION H - 417
1jx6_A_2101jx6   A     AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL I - 211
1jx6_A_2101jx6   A     AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL R - 215
1uu1_A_1071uu1   A     HSAPHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER S - 107
1uu1_A_1071uu1   A     HSAPHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER C - 108
1uu1_A_1071uu1   A     PMP4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE Y - 109
1uu1_A_1071uu1   A     HSAPHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER F - 112

Clusters included in this Subclass
CLUSTER: HE.1.23