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Information on SUBCLASS 2.2.13
Subclass Accession number: 5359
Subclass: 2.2.13 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004765 (>75 %)  GO:0016301 (>75 %)  GO:0016772 (>75 %)  GO:0016773 (>75 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  52566 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 15.7 +/- 18.8
Average RMSD (Å) : 0.700 +/- 0.224

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXhphp
(φψ)-conformation: aapabb
Pattern: [anp][EGK][KR]x[dps][kl][iy][AEKR][eqry][IKV][ACS][DNQT][flmv][rsty]
Conservation:-0.7710.4322.777-0.652-0.717-0.7130.2080.256-0.728-0.0510.9480.467-0.383-1.074
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d2n_A_5861d2n   A593606MKKIFDDAYKSQLSHHHHHHHHHTSSEEaaaaaaaaaababb
1kag_A_1301kag   A138151NERNPLYEEIADVTHHHHHHHHHH-SEEaaaaaaaaaaxabb
1l4u_A_1251l4u   A134147AKRAPLYRRVATMRHHHHHHHHHH-SEEaaaaaaaaaaxabb
1q1g_A_251q1g   A2538PGRVDKIKVVCDSYHHHHHHHHTTSSEEaaaaaaaaaaxabb
1via_A_1241via   A132145NERLSKYEQKANFIHHHHHHHHHH-SEEaaaaaaaaaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l4u_A_1251l4u   A     PTPLATINUM (II) ION R - 130
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 130
1l4u_A_1251l4u   A     PTPLATINUM (II) ION M - 133
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID M - 133
1l4u_A_1251l4u   A     PTPLATINUM (II) ION A - 134
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID A - 134
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID K - 135
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID A - 137
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID P - 138
1l4u_A_1251l4u   A     EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID R - 141
1via_A_1241via   A     MSESELENOMETHIONINE A - 127
1via_A_1241via   A     MSESELENOMETHIONINE R - 134
1via_A_1241via   A     MSESELENOMETHIONINE Y - 138

Clusters included in this Subclass
CLUSTER: HE.3.146