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Information on SUBCLASS 2.4.8
Subclass Accession number: 5394
Subclass: 2.4.8 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.4 (>75 %)  1.4.3 (>75 %)  1.4.3.6
SCOP : 49993 (>75 %)  49998 (>75 %)  49999 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 17.6 +/- 17.8
Average RMSD (Å) : 0.760 +/- 0.305

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XpGXpp
(φψ)-conformation: aalabb
Pattern: x[afv][EQY]x[an]x[den]x[AILM][EHKN][AGKQ][AET][G]x[ty]x[IV]
Conservation:-0.494-0.7160.465-1.164-0.467-0.778-0.358-0.5970.1900.288-0.2760.2393.062-0.5200.215-0.5461.457
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ed8_A_3351ed8   A348364AVQRALEFAKKEGNTLVHHHHHHHHHHHHSSEEEaaaaaaaaaaaavabxb
1ehi_A_171ehi   A2339SAQNFYNAIEATGKYEIHHHHHHHHHHHHSSEEEaaaaaaaaaaaavabbb
1f0k_A_2881f0k   A288304QQYWNALPLEKAGAAKIHHHHHHHHHHHTTSEEEaaaaaaaaaaaavabbb
1kqo_A_221kqo   A2743LFELAKDYMNGTGRYTVHHHHHHHHHHHTSSEEEaaaaaaaaaaaavabbx
1nup_A_201nup   A2541MFEVARDHLHQTGMYQVHHHHHHHHHHHTTSEEEaaaaaaaaaaaavabbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ehi_A_171ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID V - 19
1ehi_A_171ehi   A     PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID S - 23
1kqo_A_221kqo   A     DNDNICOTINIC ACID ADENINE DINUCLEOTIDE M - 23
1kqo_A_221kqo   A     DNDNICOTINIC ACID ADENINE DINUCLEOTIDE H - 24
1kqo_A_221kqo   A     DNDNICOTINIC ACID ADENINE DINUCLEOTIDE L - 27
1kqo_A_221kqo   A     DNDNICOTINIC ACID ADENINE DINUCLEOTIDE S - 49
1nup_A_201nup   A     NMNBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE S - 47

Clusters included in this Subclass
CLUSTER: HE.2.94