Information on SUBCLASS 2.10.1 |
Subclass Accession number: 5445
Subclass: 2.10.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 21.8 +/- 18.6 Average RMSD (Å) : 0.420 +/- 0.084 Consensus geometry
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Consensus Sequence: | pppXVh |
(φψ)-conformation: | aabwbb |
Pattern: | [AGSV] | [CFLTV] | [AEPS] | x | [A] | [aikl] | x | [il] | [AS] | x | x | [ehny] | [KPQ] | [V] | [AILW] | [IKMV] | x |
Conservation: | -0.361 | -0.575 | -0.227 | -0.796 | 2.222 | -0.861 | -0.550 | 0.125 | 1.060 | -0.638 | -0.607 | -0.511 | 0.868 | 2.222 | -0.447 | -0.028 | -0.896 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1chu_A_18 | 1chu | A | 20 | 36 | GLSLALRLADQHQVIVL | HHHHHHHHTTTS-EEEE | aaaaaaaaaaabbbbxx |
1ju2_A_38 | 1ju2 | A | 38 | 54 | GCPLAATLSEKYKVLVL | HHHHHHHHTTTS-EEEE | aaaaaaaaaaabxbbbb |
1o17_A_90 | 1o17 | A | 91 | 107 | STASAILLSLVNPVAKH | HHHHHHHHTTTS-EEEE | aaaaaaaaaaabwbbxb |
1pox_A_522 | 1pox | A | 525 | 541 | VFEQAKAIAQHEPVLID | HHHHHHHHTTTS-EEEE | aaaaaaaaaaabwbbbx |
1qe3_A_364 | 1qe3 | A | 367 | 383 | AVAYASAQSHYAPVWMY | HHHHHHHHTTTS-EEEE | aaaaaaaaaaabwbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ju2_A_38 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 38 |
1ju2_A_38 | 1ju2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | L - 54 |
Clusters included in this Subclass |
CLUSTER: HE.4.103 |
CLUSTER: HE.6.334 |