Information on SUBCLASS 3.3.10 |
Subclass Accession number: 5485
Subclass: 3.3.10 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation SCOP : 53473 (>75 %) 53474 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 13.9 +/- 13.3 Average RMSD (Å) : 0.633 +/- 0.058 Consensus geometry
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Consensus Sequence: | XXXXphV |
(φψ)-conformation: | aalpabb |
Pattern: | [AKV] | [DEY] | [IMV] | [LW] | x | x | x | [CPT] | [DQR] | [IY] | [V] | [APV] |
Conservation: | -0.989 | -0.407 | 0.873 | 0.422 | -1.454 | -0.058 | 0.291 | -0.523 | -0.174 | 0.390 | 2.385 | -0.756 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i6l_A_131 | 1i6l | A | 131 | 142 | ADILLYNTDIVP | HHHHTTT-SEEE | aaaaaalxabbx |
1qas_A_565 | 1qas | A | 565 | 576 | VEMWNGGCQIVA | HHHHTTT--EEE | aaaaaavpabxx |
1qpg_*_37 | 1qpg | - | 47 | 58 | KYVLEHHPRYVV | HHHHTT--SEEE | aaaaaalxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | A - 131 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | D - 132 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | D - 132 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | I - 133 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | I - 133 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | L - 134 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | L - 135 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | Y - 136 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | N - 137 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | D - 139 |
1i6l_A_131 | 1i6l | A | MSESELENOMETHIONINE | V - 141 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | V - 141 |
1i6l_A_131 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | P - 142 |
1qpg_*_37 | 1qpg | * | 3PG3-PHOSPHOGLYCERIC ACID | R - 38 |
Clusters included in this Subclass |
CLUSTER: HE.4.351 |