Information on SUBCLASS 3.16.1 |
Subclass Accession number: 5551
Subclass: 3.16.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 34.5 +/- 27.5 Average RMSD (Å) : 0.680 +/- 0.363 Consensus geometry
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Consensus Sequence: | pchppXh |
(φψ)-conformation: | aapapbb |
Pattern: | [APT] | [ER] | [PT] | [AI] | [AEST] | x | [FL] | [AKV] | [KQ] | [EKT] | [AL] | [KNS] | [DGKR] | [AF] | [KNST] | [ST] | [den] | [IV] | [ntw] | [ilv] |
Conservation: | -0.531 | 1.043 | 1.574 | -0.013 | -0.757 | -0.752 | 1.061 | -1.010 | 1.288 | -0.127 | -0.013 | 0.161 | -1.169 | 0.518 | -0.485 | 1.006 | -1.032 | 1.742 | -1.416 | -1.086 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mo1_A_16 | 1mo1 | A | 16 | 35 | ARPAALFVQEANRFTSDVFL | HHHHHHHHHHHTTSSSEEEE | aaaaaaaaaaaaabapxbbb |
1opd_*_16 | 1opd | - | 16 | 35 | TRPAAQFVKEAKGFTSEITV | HHHHHHHHHHHHTSSSEEEE | aaaaaaaaaaaaaxapxbbb |
1pch_*_16 | 1pch | - | 16 | 35 | ARPASVLAKEASKFSSNITI | HHHHHHHHHHHTT-SSEEEE | aaaaaaaaaaaaaxapxbbb |
1ptf_*_16 | 1ptf | - | 16 | 35 | ARPATLLVQTASKFNSDINL | HHHHHHHHHHHTT-SSEEEE | eaaaaaaaaaaaabapxbbb |
1vpe_*_298 | 1vpe | - | 298 | 317 | PETIELFKQKLSDAKTVVWN | HHHHHHHHHHHTT-SEEEEE | aaaaaaaaaaaaaxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1mo1_A_16 | 1mo1 | A | MSESELENOMETHIONINE | A - 16 |
1mo1_A_16 | 1mo1 | A | MSESELENOMETHIONINE | R - 17 |
1mo1_A_16 | 1mo1 | A | MSESELENOMETHIONINE | A - 19 |
1mo1_A_16 | 1mo1 | A | MSESELENOMETHIONINE | A - 20 |
1mo1_A_16 | 1mo1 | A | CRYPROPANE-1,2,3-TRIOL | E - 36 |
1mo1_A_16 | 1mo1 | A | CRYPROPANE-1,2,3-TRIOL | K - 37 |
1vpe_*_298 | 1vpe | * | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | N - 317 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1opd_*_16 | 1opd | * | ACTTHE ACTIVE CENTER IS COMPOSED PRIMARILY OF TWO RESIDUES WHICH ARE CRITICAL IN PHOSPHOTRANSFER, HIS 15 AND ARG 17. | R - 17 |
Clusters included in this Subclass |
CLUSTER: HE.4.197 |