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Information on SUBCLASS 3.16.1
Subclass Accession number: 5551
Subclass: 3.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 34.5 +/- 27.5
Average RMSD (Å) : 0.680 +/- 0.363

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pchppXh
(φψ)-conformation: aapapbb
Pattern: [APT][ER][PT][AI][AEST]x[FL][AKV][KQ][EKT][AL][KNS][DGKR][AF][KNST][ST][den][IV][ntw][ilv]
Conservation:-0.5311.0431.574-0.013-0.757-0.7521.061-1.0101.288-0.127-0.0130.161-1.1690.518-0.4851.006-1.0321.742-1.416-1.086
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1mo1_A_161mo1   A1635ARPAALFVQEANRFTSDVFLHHHHHHHHHHHTTSSSEEEEaaaaaaaaaaaaabapxbbb
1opd_*_161opd   -1635TRPAAQFVKEAKGFTSEITVHHHHHHHHHHHHTSSSEEEEaaaaaaaaaaaaaxapxbbb
1pch_*_161pch   -1635ARPASVLAKEASKFSSNITIHHHHHHHHHHHTT-SSEEEEaaaaaaaaaaaaaxapxbbb
1ptf_*_161ptf   -1635ARPATLLVQTASKFNSDINLHHHHHHHHHHHTT-SSEEEEeaaaaaaaaaaaabapxbbb
1vpe_*_2981vpe   -298317PETIELFKQKLSDAKTVVWNHHHHHHHHHHHTT-SEEEEEaaaaaaaaaaaaaxabbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1mo1_A_161mo1   A     MSESELENOMETHIONINE A - 16
1mo1_A_161mo1   A     MSESELENOMETHIONINE R - 17
1mo1_A_161mo1   A     MSESELENOMETHIONINE A - 19
1mo1_A_161mo1   A     MSESELENOMETHIONINE A - 20
1mo1_A_161mo1   A     CRYPROPANE-1,2,3-TRIOL E - 36
1mo1_A_161mo1   A     CRYPROPANE-1,2,3-TRIOL K - 37
1vpe_*_2981vpe   *     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER N - 317
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1opd_*_161opd   * ACTTHE ACTIVE CENTER IS COMPOSED PRIMARILY OF TWO RESIDUES WHICH ARE CRITICAL IN PHOSPHOTRANSFER, HIS 15 AND ARG 17.R - 17

Clusters included in this Subclass
CLUSTER: HE.4.197