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Information on SUBCLASS 2.5.3
Subclass Accession number: 559
Subclass: 2.5.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0046914 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 10.0 +/- 14.5
Average RMSD (Å) : 0.380 +/- 0.084

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXcXh
(φψ)-conformation: bbplbb
Pattern: x[ars]x[DG]x[avy]
Conservation:-0.593-0.048-0.9031.925-0.351-0.030
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fpz_A_521fpz   A5257KFKDVREETTEEbbpvxb
1ihn_A_141ihn   A1520CRFGSVEETTEEbbpvbb
1j1y_A_121j1y   A1621LAPGEAEETTEEbbpvbb
1koi_A_671koi   A7782ESLGKYEETTEEabxvbb
1nnx_A_381nnx   A5055ISDDLYEETTEEabxvbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ihn_A_141ihn   A     MSESELENOMETHIONINE T - 21
1ihn_A_141ihn   A     MSESELENOMETHIONINE Y - 22
1koi_A_671koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 68
1koi_A_671koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 69
1koi_A_671koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 70
1koi_A_671koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 72
1koi_A_671koi   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 85

Clusters included in this Subclass
CLUSTER: HA.1.40