Logo
Information on SUBCLASS 4.1.10
Subclass Accession number: 5596
Subclass: 4.1.10 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  2.5 (>50 %)  2.5.1 (>50 %)  2.5.1.6
GO : GO:0000287 (>50 %)  GO:0004478 (>50 %)  GO:0005524 (>50 %)  GO:0016765 (>50 %)  GO:0030554 (>50 %)  
SCOP : 55972 (>50 %)  55973 (>50 %)  55974 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 12.8 +/- 12.6
Average RMSD (Å) : 1.000 +/- 0.361

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: phhXXXpX
(φψ)-conformation: aabaapbb
Pattern: xxx[EQ][KQ][FMW][FGV][NP][ADN][AGK][DKT]xx
Conservation:-0.879-0.587-0.7821.8201.4460.774-1.1711.081-0.393-0.490-0.393-0.428-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g9m_G_3351g9m   G348360KLREQFGNNKTIIHHHHHS-SS--EEaaaaaabaaxbbb
1lgy_A_411lgy   A4153VQCQKWVPDGKIIHHHHHH-TT-EEEaaaaaabaaxbxa
1sfe_*_441sfe   -4960SELQQMFPAADN.HHHHHHSTT-EE.aaaaaabaapbx.
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE R - 335
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE A - 336
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE K - 337
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE N - 339
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE N - 340
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE K - 343
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE Q - 344
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE I - 345
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE S - 347
1g9m_G_3351g9m   G     NAGN-ACETYL-D-GLUCOSAMINE K - 348

Clusters included in this Subclass
CLUSTER: HE.5.340