ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.57.1

Subclass Accession number: 5717
Subclass: 4.57.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.27 (>75 %)
GO : GO:0004457 (>75 %)  GO:0004459 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)
SCOP : 51734 (>75 %)  51735 (>75 %)  51848 (>75 %)

Number of loops: 4

Average sequence ID (%) : 92.7 +/- -22.1
Average RMSD (Å) : 0.175 +/- 0.050

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 225-270

Consensus Sequence:	LFLpThKI
(φψ)-conformation:	aabababb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	0.215	0.987	0.215	-0.557	0.215	0.987	0.215	0.215	0.215	0.987	-0.557	0.215	2.532	0.987	-0.557	-0.557	0.987	-0.557	-1.930	0.215	-1.859	0.215	-0.557	-0.557	-1.714

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1i0z_A_55	1i0z	A	55	79	EDKLKGEMMDLQHGSLFLQTPKIVA	HHHHHHHHHHHHHTGGG---SEEEE	aaaaaaaaaaaaaaaaabababbbb
1i10_A_54	1i10	A	54	78	EDKLKGEMMDLQHGSLFLRTPKIVS	HHHHHHHHHHHHTTGGG-S--EEEE	aaaaaaaaaaaaaaaaabababbbb
6ldh_*_55	6ldh	-	55	79	EDKLKGEMMDLQHGSLFLHTAKIVS	HHHHHHHHHHHHHTGGG---S-EEE	aaaaaaaaaaaaaaaaabababbbb
9ldt_A_56	9ldt	A	56	80	EDKLKGEMMDLQHGSLFLRTPKIVS	HHHHHHHHHHHHHTGGG-S--EEEE	aaaaaaaaaaaaaaaaabababbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1i0z_A_55	1i0z	A	NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE	K - 57
1i10_A_54	1i10	A	NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE	K - 56
9ldt_A_56	9ldt	A	NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE	K - 58

Clusters included in this Subclass