| Information on SUBCLASS 5.13.1 |
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Subclass Accession number: 5779
Subclass: 5.13.1
Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() Consensus coordinates:
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Number of loops: 6 Average sequence ID (%) : 16.4 +/- 22.5 Average RMSD (Å) : 0.900 +/- 0.276 Consensus geometry
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| Consensus Sequence: | XphPXpXhX |
| (φψ)-conformation: | aappaaabb |
| Pattern: | x | x | x | [DEQRT] | [ACLV] | [DP] | x | [DES] | x | [frwy] | x |
| Conservation: | -0.459 | -0.719 | -0.490 | 0.163 | 0.217 | 2.309 | -0.910 | 1.352 | -0.673 | -0.072 | -0.716 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1aun_*_130 | 1aun | - | 130 | 140 | INGECPGSLRV | HHHH--TTTEE | aaaapxaaaxb |
| 1doi_*_23 | 1doi | - | 28 | 38 | SDMDLDDEDYG | HHS---TTTEE | aaxaxxaaabe |
| 1nw1_A_67 | 1nw1 | A | 67 | 77 | AWKTVPLEHLR | HHHH--GGGEE | aaaapxaaabb |
| 1pcv_A_129 | 1pcv | A | 129 | 139 | INGECPRELRV | HHHH--TTTEE | aaaappaaaxb |
| 1rhs_*_274 | 1rhs | - | 278 | 288 | WFHRAPPETWV | HHHHS-GGGEE | aaaaxxaaabb |
| 1sio_A_303 | 1sio | A | 305 | 315 | TLYQLPADVFH | HHHHS-GGGEE | aaaaxpaaabx |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | S - 274 |
| 1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | W - 275 |
| 1rhs_*_274 | 1rhs | * | CSSS-MERCAPTOCYSTEINE | F - 276 |
| Clusters included in this Subclass |
| CLUSTER: HE.6.68 |