Logo
Information on SUBCLASS 5.13.2
Subclass Accession number: 5780
Subclass: 5.13.2 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  
 Number of loops: 4

Average sequence ID (%) : 10.7 +/- 11.5
Average RMSD (Å) : 1.175 +/- 0.263

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXhXXcphX
(φψ)-conformation: aappaaabb
Pattern: x[ARS][AEM][AQRT][AL]x[FKL][DNP]x[DKR][KT][HIMV]xx
Conservation:-0.8950.6980.054-0.1080.860-0.895-0.1561.275-0.5451.0191.5550.067-0.983-1.945
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jj2_N_251jj2   N2942VAERLEKPRRTHAEHHHHHHS-GGGSEEaaaaaaxpaaaxxb
1ne9_A_2131ne9   A217230QRMQAAFDADTMRIHHHHHHS-TTTEEEaaaaaabxaaabbb
1s4n_A_3611s4n   A367380IAAALFLPKDKIHYHHHHHHS-GGGEEEaaaaaabxaaabbx
1zym_A_1651zym   A165178PSETAQLNLKKVLGHHHHHHS-GGGEEEaaaaaaxxaaNbae
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jj2_N_251jj2   N     CDCADMIUM ION L - 33
1jj2_N_251jj2   N     CDCADMIUM ION R - 37
1jj2_N_251jj2   N     CDCADMIUM ION H - 40
1s4n_A_3611s4n   A     GOLGLYCEROL D - 361
1s4n_A_3611s4n   A     GOLGLYCEROL A - 362
1s4n_A_3611s4n   A     GOLGLYCEROL P - 363

Clusters included in this Subclass
CLUSTER: HE.4.295
CLUSTER: HE.6.206