Logo
Information on SUBCLASS 5.55.1
Subclass Accession number: 5834
Subclass: 5.55.1 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.9 +/- 6.4
Average RMSD (Å) : 0.933 +/- 0.231

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XpXXpXpXX
(φψ)-conformation: aabapaabb
Pattern: xx[ILV][FKQ][QS]x[AIY][EGN][DQR]xx[NRS][ADP][ENT][KM]xx
Conservation:-0.811-0.9461.760-0.6761.7550.671-0.5400.2720.407-0.811-0.4050.542-0.2700.4071.349-1.352-1.352
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i6i_A_1181i6i   A124140EDLFSRINDTTNDNMSYHHHHHHHHT---TTEEEaaaaaaaaapaxaabbb
1shu_X_591shu   X6480NFVQQLAERFVSPEMRLHHHHHHHHH---TTEEEaaaaaaaaabapaaxxb
1yaa_A_181yaa   A1834FGIKQRYGQDQRATKVDHHHHHHHHT---SS-EEaaaaaaaaabapaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1yaa_A_181yaa   A     MAEMALEIC ACID F - 18

Clusters included in this Subclass
CLUSTER: HE.6.184