Information on SUBCLASS 6.17.1 |
Subclass Accession number: 5882
Subclass: 6.17.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 50.2 +/- 27.3 Average RMSD (Å) : 0.233 +/- 0.052 Consensus geometry
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Consensus Sequence: | XpchpGXcVX |
(φψ)-conformation: | aagbalplbb |
Pattern: | x | [adk] | [alv] | [hqw] | x | [nqr] | [gn] | [fily] | [kt] | [g] | [as] | [gn] | [v] | [kv] | [av] | [ag] | [iv] | [ilv] | [d] |
Conservation: | -1.422 | -1.155 | -0.706 | -0.496 | -1.293 | -0.298 | 0.475 | -0.473 | -0.238 | 2.228 | 0.005 | 0.295 | 0.938 | -0.540 | -0.231 | -0.022 | 0.616 | 0.088 | 2.228 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bh6_A_13 | 1bh6 | A | 14 | 32 | DKVQAQGYKGANVKVGIID | HHHHHTT---TT-EEEEEE | aaaaaavbavxvbxbbbxb |
1gci_*_13 | 1gci | - | 14 | 32 | PAAHNRGLTGSGVKVAVLD | HHHHHTT-S-TT-EEEEEE | aaaaaavbavpvbxbxbxb |
1r0r_E_13 | 1r0r | E | 14 | 32 | DKVQAQGFKGANVKVAVLD | HHHHHHT-S-TT-EEEEEE | aaaaaagbavpvbxbbxxb |
1r64_A_157 | 1r64 | A | 157 | 175 | LDLWYNNITGAGVVAAIVD | HHHHHTT-S-TT-EEEEEE | aaaaaavbavxvbbbbxxb |
1s01_*_13 | 1s01 | - | 14 | 32 | PALHSQGYTGSNVKVAVID | HHHHHTT-S-TT-EEEEEE | aaaaaavbavpvxxbxbxb |
1sup_*_13 | 1sup | - | 14 | 32 | PALHSQGYTGSNVKVAVID | HHHHHHT-S-TT-EEEEEE | aaaaaavbavxvxxbbxxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bh6_A_13 | 1bh6 | A | 1BHN-BENZYLOXYCARBONYL-ALA-PRO-3-AMINO-4-PHENYL-BUTAN-2-OL | D - 32 |
1r64_A_157 | 1r64 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 162 |
1r64_A_157 | 1r64 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 163 |
1r64_A_157 | 1r64 | A | NAGN-ACETYL-D-GLUCOSAMINE | I - 164 |
1r64_A_157 | 1r64 | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 165 |
1r64_A_157 | 1r64 | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 167 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1bh6_A_13 | 1bh6 | A | ACTACTIVE SITE. | D - 32 |
Clusters included in this Subclass |
CLUSTER: HE.7.27 |