ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 12.3.1

Subclass Accession number: 6012
Subclass: 12.3.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 22 (>75 %)  3 (>75 %)  4 (>75 %)  5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.9
GO : GO:0004347 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)
SCOP : 52128 (>75 %)  52129 (>75 %)  52130 (>75 %)  53696 (>75 %)  53697 (>75 %)  53701 (>75 %)

Number of loops: 3

Average sequence ID (%) : 87.4 +/- -64.4
Average RMSD (Å) : 0.167 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	RSGpWKGYpGKpITDV
(φψ)-conformation:	aalapbpaalpppabb

Pattern:	[M]	[P]	[E]	[V]	[N]	[KR]	[V]	[L]	[DE]	[K]	[M]	[K]	[AS]	[F]	[C]	[KQ]	[R]	[V]	[R]	[S]	[G]	[DE]	[W]	[K]	[G]	[Y]	[ST]	[G]	[K]	[ST]	[I]	[T]	[D]	[V]	[I]	[N]	[I]
Conservation:	0.015	1.206	0.015	-0.580	0.611	-0.877	-0.580	-0.580	-0.724	0.015	0.015	0.015	-1.468	0.611	2.397	-1.175	0.015	-0.580	0.015	-0.580	0.611	-0.724	3.587	0.015	0.611	1.206	-1.320	0.611	0.015	-1.320	-0.580	0.015	0.611	-0.580	-0.580	0.611	-0.580

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1g98_A_118	1g98	A	118	154	MPEVNKVLDKMKAFCQRVRSGDWKGYTGKTITDVINI	HHHHHHHHHHHHHHHHHHHTT-SB-TTS-B--EEEEE	aaaaaaaaaaaaaaaaaaaavaxbxaavxxxabbbxb
1gzd_A_118	1gzd	A	118	154	MPEVNRVLEKMKSFCKRVRSGEWKGYSGKSITDVINI	HHHHHHHHHHHHHHHHHHHHT-SB-TTS-B--EEEEE	aaaaaaaaaaaaaaaaaaaavaxbxaavbxxabbbxb
1iat_A_118	1iat	A	118	154	MPEVNKVLDKMKSFCQRVRSGDWKGYTGKTITDVINI	HHHHHHHHHHHHHHHHHHHHT-SB-TTS-B--EEEEE	aaaaaaaaaaaaaaaaaaaavaxbxaavxxxabbbxb

Clusters included in this Subclass