ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 17.1.1

Subclass Accession number: 6023
Subclass: 17.1.1

Type: HE alpha-beta
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 5.3 (>75 %)  5.3.1 (>75 %)  5.3.1.9
GO : GO:0004347 (>75 %)  GO:0016853 (>75 %)  GO:0016860 (>75 %)  GO:0016861 (>75 %)
SCOP : 53696 (>75 %)  53697 (>75 %)  53701 (>75 %)

Number of loops: 3

Average sequence ID (%) : 98.0 +/- -96.0
Average RMSD (Å) : 0.200 +/- 0.100

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	SNGKYITKSGXRVDHQTGPIV
(φψ)-conformation:	aapbabpaalpppabpFpppb

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	0.388	-0.908	-0.908	1.036	0.388	-0.260	-0.260	0.388	0.388	-0.260	-0.260	-0.908	0.388	0.388	-0.260	1.036	-0.908	-0.260	-0.260	-0.908	0.388	-2.042	-0.260	-0.908	0.388	1.683	-0.260	-0.260	0.388	1.036	-0.908	-0.908	3.627

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1g98_A_347	1g98	A	347	379	FAAYFQQGDMESNGKYITKSGARVDHQTGPIVW	HHHHHHHHHHHHH---BBTTS-B-SS----EEE	aaaaaaaaaaaaaxbabxaavxxxabxFpxxxb
1gzd_A_347	1gzd	A	347	379	FAAYFQQGDMESNGKYITKSGTRVDHQTGPIVW	HHHHHHHHHHHHH---B-TTS-B-SS----EEE	aaaaaaaaaaaaaxbabxaavxxxabxFpxxbb
1iat_A_347	1iat	A	347	379	FAAYFQQGDMESNGKYITKSGTRVDHQTGPIVW	HHHHHHHHHHHHH---BBTTS-B-SS----EEE	aaaaaaaaaaaaaxbNbxaavbxxabxFpxxxb

PDB ligands within a cut-off distance of 6 Å in this subclass

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gzd_A_347	1gzd	A	ASBPUTATIVE BASE CATALYST IN ISOMERASE REACTION	E - 357

Clusters included in this Subclass