Information on SUBCLASS 2.2.49 |
Subclass Accession number: 6094
Subclass: 2.2.49 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 9.1 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
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Consensus Sequence: | XXhXAh |
(φψ)-conformation: | bbaabb |
Pattern: | [GV] | [AT] | [NY] | [TV] | [CN] | [LT] | [AG] | [SV] | [NW] | [MP] | x | [A] | [MV] | [DY] | [QS] | [G] | [TV] | [AT] | [KT] | [LV] | [EH] | [FV] |
Conservation: | -1.315 | -0.110 | -0.110 | -0.110 | -0.110 | -0.592 | 0.131 | -1.315 | -0.110 | -0.351 | -0.833 | 1.578 | 0.373 | -0.592 | -0.110 | 3.506 | -0.110 | -0.110 | -0.351 | 0.131 | 0.855 | -0.351 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dlc_*_398 | 1dlc | - | 403 | 424 | VANTNLAVWPSAVYSGVTKVEF | EEEEEEEEETTEEEEEEEEEEE | bbbbbbbxxaabbbbbxabbbx |
1gl4_B_1835 | 1gl4 | B | 1835 | 1856 | GTYVCTGSNMFAMDQGTATLHV | EEEEEEEE-SS-EEEEEEEEEE | exbbbbxbbaabbbbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gl4_B_1835 | 1gl4 | B | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | V - 1838 |
1gl4_B_1835 | 1gl4 | B | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | Q - 1849 |
1gl4_B_1835 | 1gl4 | B | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | G - 1850 |
1gl4_B_1835 | 1gl4 | B | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | T - 1851 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gl4_B_1835 | 1gl4 | B | EPEEPE BINDING SITE FOR CHAIN B | Q - 1849 |
1gl4_B_1835 | 1gl4 | B | EPEEPE BINDING SITE FOR CHAIN B | T - 1851 |
Clusters included in this Subclass |
CLUSTER: HA.3.269 |