Information on SUBCLASS 2.3.23 |
Subclass Accession number: 6124
Subclass: 2.3.23 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004850 (>50 %) GO:0016757 (>50 %) GO:0016763 (>50 %) SCOP : 53162 (>50 %) 53167 (>50 %) 53168 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 14.3 +/- 21.2 Average RMSD (Å) : 0.667 +/- 0.289 Consensus geometry
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Consensus Sequence: | ppppXX |
(φψ)-conformation: | bbeabb |
Pattern: | [IV] | [DKR] | x | [AI] | [SY] | [HKN] | [RS] | [DE] | x | [AKT] | x | [LVW] | [EGR] | [ACW] |
Conservation: | 2.052 | -0.288 | -0.556 | -0.167 | -0.163 | 0.370 | 0.296 | 2.293 | -0.420 | -0.815 | -0.552 | -0.683 | -1.078 | -0.288 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hhs_A_446 | 1hhs | A | 446 | 459 | IRQISKSDDAMLGW | EEEEEETTEEEEEE | bbbbbbeabbbbbb |
1q1g_A_37 | 1q1g | A | 39 | 52 | VDLAYNREYKSVEC | EEEEEETTEEEEEE | bpabbbeabbbbxx |
1rxy_A_39 | 1rxy | A | 42 | 55 | VKLASHREFTTWRA | EEEEEETTEEEEEE | bxabbbeaxbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hhs_A_446 | 1hhs | A | MNMANGANESE (II) ION | D - 453 |
1hhs_A_446 | 1hhs | A | MNMANGANESE (II) ION | D - 454 |
1hhs_A_446 | 1hhs | A | MNMANGANESE (II) ION | A - 455 |
1hhs_A_446 | 1hhs | A | MNMANGANESE (II) ION | M - 456 |
1q1g_A_37 | 1q1g | A | MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM | R - 45 |
1q1g_A_37 | 1q1g | A | MTI3,4-DIHYDROXY-2-[(METHYLSULFANYL)METHYL]-5-(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)PYRROLIDINIUM | Y - 47 |
1rxy_A_39 | 1rxy | A | ACTACETATE ION | H - 47 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hhs_A_446 | 1hhs | A | CA1THE THREE CONSERVED ACTIVE SITE ASPARTATES | D - 453 |
1hhs_A_446 | 1hhs | A | CA1THE THREE CONSERVED ACTIVE SITE ASPARTATES | D - 454 |
Clusters included in this Subclass |
CLUSTER: HA.1.135 |