Information on SUBCLASS 2.8.2 |
Subclass Accession number: 6158
Subclass: 2.8.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.7.1 (>75 %) 2.7.1.1 GO : GO:0004396 (>75 %) GO:0016301 (>75 %) GO:0016773 (>75 %) GO:0019200 (>75 %) SCOP : 53066 (>75 %) 53067 (>75 %) 53083 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 19.0 +/- 16.6 Average RMSD (Å) : 0.700 +/- 0.265 Consensus geometry
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Consensus Sequence: | pXEGXp |
(φψ)-conformation: | bbpgbp |
Pattern: | x | [FGL] | [FTV] | [AIY] | [ES] | x | [E] | [G] | [EGK] | [EKS] | [DPT] | [TV] | [FWY] | x |
Conservation: | -0.801 | -0.986 | -0.554 | -0.677 | 0.309 | -0.615 | 1.670 | 2.226 | -0.492 | -0.121 | -0.368 | 0.158 | 1.114 | -0.863 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c9o_A_15 | 1c9o | A | 15 | 28 | YGFIEVEGGSDVFV | EEEEEETTEEEEEE | bbbxxbxvbxxbxb |
1f6f_B_35 | 1f6f | B | 37 | 50 | SLTYSKEGEKTTYE | EEEEEETTEEEEEE | bbbbbbpgbabxbb |
1vju_A_113 | 1vju | A | 120 | 133 | LFVAEREGKEPVWW | EEEEEETTEEEEEE | bbbbxbxvbxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1c9o_A_15 | 1c9o | A | TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | Y - 15 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | V - 118 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | R - 119 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | L - 120 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | F - 121 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | V - 122 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | P - 130 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | V - 131 |
1vju_A_113 | 1vju | A | MSESELENOMETHIONINE | W - 132 |
Clusters included in this Subclass |
CLUSTER: HA.3.220 |