Information on SUBCLASS 3.21.1 |
Subclass Accession number: 6220
Subclass: 3.21.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 7.1 +/- 9.3 Average RMSD (Å) : 0.617 +/- 0.232 Consensus geometry
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Consensus Sequence: | hXXppph |
(φψ)-conformation: | bbFaabb |
Pattern: | [CFKV] | [GILV] | [hktw] | [afimv] | [crtw] | [gnqr] | [dhrt] | [DKRST] | [DEST] | [ACFGIY] | [almv] | [givw] | [crstw] | [hlv] |
Conservation: | 0.489 | 0.176 | -0.399 | -0.087 | -0.298 | -0.423 | -0.714 | 1.073 | 2.620 | -0.739 | 0.547 | -1.233 | -1.173 | 0.163 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b4b_A_118 | 1b4b | A | 119 | 132 | VGTICGDDTCLIIC | EEEEE-SSEEEEEE | abbbbFaabbxbxb |
1jnr_B_76 | 1jnr | B | 77 | 90 | CVPMRGTSDIMWTV | EEEEE-SSEEEEEE | bbxbxFaabbbbbb |
1lo7_A_77 | 1lo7 | A | 83 | 96 | CIKEWRRKSFVQRH | EEEEE-SSEEEEEE | bxabbFaabbbbbb |
1mby_A_848 | 1mby | A | 851 | 864 | VGWATQLTSGAVWV | EEEEE-SSEEEEEE | bbbbbFaabbbbbb |
1r2z_A_61 | 1r2z | A | 61 | 74 | FLKFLLDRDALISH | EEEEE-SSEEEEEE | xbbxxFaabbbxbb |
1wwb_X_330 | 1wwb | X | 333 | 346 | KIHVTNHTEYHGCL | EEEEE-SSEEEEEE | bxabbFaaxbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lo7_A_77 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | R - 88 |
1lo7_A_77 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | R - 89 |
1lo7_A_77 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | K - 90 |
1lo7_A_77 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | S - 91 |
1lo7_A_77 | 1lo7 | A | 4CO4-HYDROXYPHENACYL COENZYME A | F - 92 |
1lo7_A_77 | 1lo7 | A | EGLETHYLENE GLYCOL | R - 95 |
Clusters included in this Subclass |
CLUSTER: HA.2.75 |