Information on SUBCLASS 4.1.23 |
Subclass Accession number: 6258
Subclass: 4.1.23 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 8.3 +/- 13.0 Average RMSD (Å) : 0.800 +/- 0.300 Consensus geometry
|
Consensus Sequence: | hcXcppph |
(φψ)-conformation: | bbaaalbb |
Pattern: | x | [LVY] | [GPQ] | [ASV] | [MT] | [AFI] | [ANT] | [DNS] | [IV] | [DN] | x | [DK] | [ENR] | [EHK] | [ST] | [CIV] | x | x | x | [FIY] |
Conservation: | -1.225 | -0.306 | -0.881 | -0.651 | 0.613 | -0.881 | -0.536 | 0.498 | 1.864 | 2.045 | -1.340 | 0.667 | 0.039 | 0.268 | 1.355 | 0.383 | -0.651 | -0.995 | -0.881 | 0.613 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mhn_A_108 | 1mhn | A | 108 | 127 | IYPATIASIDFKRETCVVVY | EEEEEEEEEETTTTEEEEEE | xbwbbxabbbaaavbbbbbx |
1qft_A_47 | 1qft | A | 48 | 67 | CVGVMANDVNEDEKSIQAEF | EEEEEEEEEETTTTEEEEEE | lxbbbbbvpbaaalbbbbbb |
1r17_A_433 | 1r17 | A | 434 | 453 | NLQSMFTNIDTKNHTVEQTI | EEEEEEEEEETTTTEEEEEE | bbbbbxabbbaaalbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qft_A_47 | 1qft | A | HSMHISTAMINE | V - 51 |
1qft_A_47 | 1qft | A | HSMHISTAMINE | I - 63 |
1qft_A_47 | 1qft | A | HSMHISTAMINE | A - 65 |
1qft_A_47 | 1qft | A | HSMHISTAMINE | F - 67 |
Clusters included in this Subclass |
CLUSTER: HA.3.227 |