|
|
|
|
|
|
|
| Information on SUBCLASS 4.22.1 |
|
Subclass Accession number: 6309
Subclass: 4.22.1 
Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 12.9 Average RMSD (Å) : 0.833 +/- 0.252 Consensus geometry
|
| Consensus Sequence: | hhhcpcpX |
| (φψ)-conformation: | bbplalbb |
| Pattern: | [DES] | [LWY] | x | [GS] | [EHY] | [ILV] | [ILV] | [MP] | [GN] | [HST] | [DG] | [RST] | x | [VY] | [TVY] |
| Conservation: | -0.034 | 0.093 | -1.943 | 0.999 | 0.093 | 0.602 | 0.602 | 0.576 | 1.283 | -0.798 | 0.846 | -0.925 | -1.307 | 1.094 | -1.180 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1gl4_A_421 | 1gl4 | A | 427 | 441 | DLHSYVVMNHGRSYT | EEEEEEETTT-EEEE | xbbbbbbpvavbbbb |
| 1p2c_B_346 | 1p2c | B | 346 | 360 | EWIGEILPGSDSTYY | EEEEEEETTTTEEEE | bxaebbbpvavxbbb |
| 1q40_A_81 | 1q40 | A | 87 | 101 | SYDGHLIPGTGTFVV | EEEEEEETTTTEEEE | bbbbbxxxvavbxxb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1q40_A_81 | 1q40 | A | GOLGLYCEROL | T - 86 |
| 1q40_A_81 | 1q40 | A | GOLGLYCEROL | S - 87 |
| 1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | D - 89 |
| 1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | V - 100 |
| Clusters included in this Subclass |
| CLUSTER: HA.5.175 |
| For any comment or web-related incidence, send an email to the webmaster. |
|