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Information on SUBCLASS 5.2.8
Subclass Accession number: 6360
Subclass: 5.2.8 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004175 (>75 %)  GO:0004252 (>75 %)  GO:0008233 (>75 %)  GO:0008236 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 2.4 +/- 4.9
Average RMSD (Å) : 0.533 +/- 0.153

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XhppcXpXX
(φψ)-conformation: bbpaalabb
Pattern: x[FIP][STY][DHS][DGN][DGS][NRT]xx[AMY][FKY][GI][AFI][APS]
Conservation:-1.085-1.5250.0170.8991.7800.8990.899-0.864-0.864-0.4240.899-0.885-0.4240.678
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1k32_A_4521k32   A453466TISDNSRFIAYGFPEE-TTS-EEEEEEEbbxaaUabbbbxbx
1lj5_A_2201lj5   A226239LPYHGDTLSMFIAAEEBTTSSEEEEEEEbxxaalabbbxbbb
1orv_A_3631orv   A363376HFTSDGNSFYKIISEE-TTSSEEEEEEEbxxaavabbbbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1lj5_A_2201lj5   A     DMSDIMETHYL SULFOXIDE E - 225
1lj5_A_2201lj5   A     DMSDIMETHYL SULFOXIDE L - 226
1lj5_A_2201lj5   A     DMSDIMETHYL SULFOXIDE P - 227
1orv_A_3631orv   A     SULSULFATE ANION H - 363
1orv_A_3631orv   A     SULSULFATE ANION I - 374

Clusters included in this Subclass
CLUSTER: HA.5.147