Information on SUBCLASS 5.5.4 |
Subclass Accession number: 6377
Subclass: 5.5.4 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 14.3 Average RMSD (Å) : 1.000 +/- 0.200 Consensus geometry
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Consensus Sequence: | pDhpTXXXX |
(φψ)-conformation: | bpaaalpbb |
Pattern: | [GL] | [LTV] | x | [CKL] | [KMR] | [TY] | [D] | [LPV] | [KQ] | [T] | [GKR] | [KV] | [PSV] | [TVY] | x | [TV] | x | x | x | x | [CQT] | x |
Conservation: | -0.211 | -0.051 | -0.645 | -0.571 | 0.097 | 0.360 | 2.991 | -0.497 | 1.108 | 2.323 | -0.126 | 0.134 | -0.645 | -0.274 | -1.239 | 0.522 | -0.719 | -0.645 | -0.719 | -0.422 | -0.348 | -0.422 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k32_A_617 | 1k32 | A | 617 | 638 | GVLLKYDVKTRKVTEVKNNLTD | EEEEEEETTT--EEEEEEEEEE | bbxbbbxaaavxbbxabblxab |
1oal_A_2 | 1oal | A | 3 | 24 | LTVKMTDLQTGKPVGTIELSQN | EEEEEEETTT--EEEEEEEEEE | bbbxbbxaaavxxaebbxbbxb |
1uca_A_148 | 1uca | A | 148 | 169 | GLRCRTDPQTKVSYLVQVVACF | EEEEEE-TTT--EEEEEEEEEE | bbbbbxxaaavxxbxabbbbbb |
Clusters included in this Subclass |
CLUSTER: HA.6.181 |