Information on SUBCLASS 5.28.1 |
Subclass Accession number: 6407
Subclass: 5.28.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 5.9 +/- 0.0 Average RMSD (Å) : 1.500 +/- 0.000 Consensus geometry
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Consensus Sequence: | RhhphhhXX |
(φψ)-conformation: | bbppllpp_ |
Pattern: | [AQ] | [IT] | [VY] | x | [CS] | [TV] | [R] | [GW] | [AY] | [DT] | [GY] | [FY] | [AV] | [MQ] | [DP] | [TY] | [AW] |
Conservation: | -0.750 | -0.750 | -0.250 | -1.000 | 0.250 | -0.250 | 2.500 | 0.750 | -0.750 | -0.250 | -0.750 | 2.250 | -0.500 | 0.000 | 0.250 | -0.500 | -0.250 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ors_B_92 | 1ors | B | 92 | 108 | ATYFCVRGYDYFAMDYW | EEEEEEEE-GGG-EEEE | exbbbbxxxpvvxxabb |
1pl3_A_79 | 1pl3 | A | 79 | 95 | QIVSSTRWATGYVQPTA | EEEEEEEE-STTS--EE | bxbbbxbbbbvvbpxbp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pl3_A_79 | 1pl3 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 90 |
1pl3_A_79 | 1pl3 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 91 |
1pl3_A_79 | 1pl3 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Q - 92 |
1pl3_A_79 | 1pl3 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | P - 93 |
Clusters included in this Subclass |
CLUSTER: HA.6.75 |