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Information on SUBCLASS 7.28.1
Subclass Accession number: 6510
Subclass: 7.28.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  3.2.1.18
GO : GO:0004553 (>75 %)  GO:0016798 (>75 %)  GO:0016997 (>75 %)  
SCOP : 50938 (>75 %)  50939 (>75 %)  50940 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 47.6 +/- 8.6
Average RMSD (Å) : 0.300 +/- 0.000

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: RDNXpXXcRPh
(φψ)-conformation: bbaaabapppb
Pattern: [EGT][IV][ERT][C][AIT][C][R][D][N][SW][KQY][GT][AS][KN][R][P][FV][IV][DKR][IL][DN]
Conservation:-1.248-0.091-1.0232.118-1.1132.1180.5030.9060.906-0.317-0.934-0.736-0.491-0.3430.5031.310-0.743-0.093-0.889-0.294-0.050
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f8e_A_2861f8e   A286306EITCTCRDNWQGSNRPVIRIDEEEEEEE--SS-SS-EEEEEEbbbbbbbxaaaxaxbxbbbbb
1nsc_A_2851nsc   A285305TIECACRDNSYTAKRPFVKLNEEEEEEE-SSS-SS-EEEEEEbbbbbbbbaaabaxxpbxbbx
2bat_*_2862bat   -286306GVRCICRDNWKGSNRPVVDINEEEEEEE--SS-SS-EEEEEEbbbbbbbbaaabaxxxbbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nsc_A_2851nsc   A     SIAO-SIALIC ACID R - 291
1nsc_A_2851nsc   A     CACALCIUM ION R - 291
1nsc_A_2851nsc   A     CACALCIUM ION D - 292
1nsc_A_2851nsc   A     SIAO-SIALIC ACID N - 293
1nsc_A_2851nsc   A     CACALCIUM ION N - 293
1nsc_A_2851nsc   A     CACALCIUM ION S - 294
1nsc_A_2851nsc   A     CACALCIUM ION Y - 295
1nsc_A_2851nsc   A     CACALCIUM ION T - 296
1nsc_A_2851nsc   A     CACALCIUM ION A - 297
1nsc_A_2851nsc   A     CACALCIUM ION K - 298
2bat_*_2862bat   *     CACALCIUM ION R - 292
2bat_*_2862bat   *     SIAO-SIALIC ACID R - 292
2bat_*_2862bat   *     CACALCIUM ION D - 293
2bat_*_2862bat   *     CACALCIUM ION N - 294
2bat_*_2862bat   *     SIAO-SIALIC ACID N - 294
2bat_*_2862bat   *     CACALCIUM ION W - 295
2bat_*_2862bat   *     CACALCIUM ION K - 296
2bat_*_2862bat   *     CACALCIUM ION G - 297
2bat_*_2862bat   *     CACALCIUM ION S - 298
2bat_*_2862bat   *     CACALCIUM ION N - 299

Clusters included in this Subclass
CLUSTER: HA.7.101