Information on SUBCLASS 8.14.1 |
Subclass Accession number: 6530
Subclass: 8.14.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005529 (>75 %) GO:0005537 (>75 %) GO:0030246 (>75 %) GO:0048029 (>75 %) SCOP : 56435 (>75 %) 56436 (>75 %) 56437 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 46.9 +/- 26.4 Average RMSD (Å) : 0.175 +/- 0.050 Consensus geometry
|
Consensus Sequence: | hpDXppEGphXX |
(φψ)-conformation: | bbaaabpgbpbp |
Pattern: | [AS] | [FW] | [LM] | [G] | [IL] | [ST] | [D] | x | x | [QT] | [E] | [GN] | x | [FW] | [emq] | [DWY] |
Conservation: | -0.219 | 0.787 | 0.131 | 1.669 | 0.044 | -0.019 | 1.669 | -1.103 | -1.353 | -0.458 | 1.120 | 0.201 | -1.144 | 0.787 | -1.181 | -0.932 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hup_*_162 | 1hup | - | 162 | 177 | AFLGITDEKTEGQFVD | EEEEEE-SSSTT--EE | bxbxbbaaabpgxxbp |
1k9j_A_326 | 1k9j | A | 326 | 341 | SWMGLSDLNQEGTWQW | EEEEEE-SSSTT--EE | bxbabbaaabpgbxbx |
1rdl_1_160 | 1rdl | 1 | 160 | 175 | AFLGITDQRTENVFED | EEEEEE-SSSTT--EE | bxbxbbaaabpvbxbx |
2msb_A_155 | 2msb | A | 155 | 170 | AFLGITDEVTEGQFMY | EEEEEE-SSSTT--EE | bxbabbaaabpvbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hup_*_162 | 1hup | * | CACALCIUM ION | D - 168 |
1hup_*_162 | 1hup | * | CACALCIUM ION | E - 169 |
1hup_*_162 | 1hup | * | CACALCIUM ION | E - 172 |
1hup_*_162 | 1hup | * | CACALCIUM ION | G - 173 |
1hup_*_162 | 1hup | * | CACALCIUM ION | F - 175 |
1k9j_A_326 | 1k9j | A | CACALCIUM ION | D - 332 |
1k9j_A_326 | 1k9j | A | CACALCIUM ION | L - 333 |
1k9j_A_326 | 1k9j | A | CACALCIUM ION | E - 336 |
1k9j_A_326 | 1k9j | A | CACALCIUM ION | G - 337 |
1k9j_A_326 | 1k9j | A | CACALCIUM ION | W - 339 |
1rdl_1_160 | 1rdl | 1 | CACALCIUM ION | D - 166 |
1rdl_1_160 | 1rdl | 1 | CACALCIUM ION | E - 170 |
1rdl_1_160 | 1rdl | 1 | CACALCIUM ION | N - 171 |
1rdl_1_160 | 1rdl | 1 | CACALCIUM ION | F - 173 |
2msb_A_155 | 2msb | A | CACALCIUM ION | D - 161 |
2msb_A_155 | 2msb | A | CACALCIUM ION | E - 162 |
2msb_A_155 | 2msb | A | CACALCIUM ION | E - 165 |
2msb_A_155 | 2msb | A | CACALCIUM ION | G - 166 |
2msb_A_155 | 2msb | A | CACALCIUM ION | F - 168 |
Clusters included in this Subclass |
CLUSTER: HA.7.73 |