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Information on SUBCLASS 8.17.1
Subclass Accession number: 6533
Subclass: 8.17.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 12.8 +/- 14.3
Average RMSD (Å) : 1.067 +/- 0.208

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXXhXhXpXXXh
(φψ)-conformation: bppabplbppbb
Pattern: x[ANT]x[CPS][AP]x[PY][GQ][HQ][DEG][DPT]x[CVW]
Conservation:-1.000-0.5450.205-0.6731.450-1.4440.9650.5881.632-0.031-0.416-1.315-0.416
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ext_A_371ext   A4052YNDCPGPGQDTDCEE--SSTTS--EEabxxabxvbxxxb
1nt4_A_1881nt4   A188199.TFSAKYQQEPGV.EEE--TTS--EE.bxbaxpvbxxbb
35c8_H_8835c8   H93105AADPPYYGHGDYWEE--SSTTS--EEbbppabxvbxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1nt4_A_1881nt4   A     G1PALPHA-D-GLUCOSE-1-PHOSPHATE E - 196
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE A - 93
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE A - 94
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE D - 95
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE P - 96
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE Y - 98
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE Y - 99
35c8_H_8835c8   H     NOXN-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE G - 100

Clusters included in this Subclass
CLUSTER: HA.8.97