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Information on SUBCLASS 4.18.1
Subclass Accession number: 674
Subclass: 4.18.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005524 (>75 %)  GO:0016772 (>75 %)  GO:0030554 (>75 %)  
 Number of loops: 5

Average sequence ID (%) : 25.0 +/- 23.0
Average RMSD (Å) : 0.820 +/- 0.335

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hXcXGEXh
(φψ)-conformation: bbeagabb
Pattern: x[EFH][APSV][eprs][DGS][dsv][G]x[fqr][LVW][IKLT][hpt]
Conservation:-1.0000.147-0.360-0.8500.384-0.6912.7270.347-0.697-0.068-0.540-0.401
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f0x_A_1071f0x   A107118LHVLGKGEQVLAEEEETTTTEEEEbbxxeagabbbb
1lvm_B_1321lvm   B132142.FPSSDGIFWKH.EEETTTTEEEE.bxbeavabbxb
1oj4_A_1511oj4   A151162AFAEGVGEILTPEEEETTTTEEEEbxbbeagaxbbx
1pgu_A_2091pgu   A213224EFSPDSGEFVITEE-STT--EEEEbxxxeavabbbb
1uek_A_1341uek   A135146AEARGVGERLKPEEEETTTTEEEEbbbbeagaxbbp
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oj4_A_1511oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL G - 155
1oj4_A_1511oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL V - 156
1oj4_A_1511oj4   A     CDM4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL G - 157
1pgu_A_2091pgu   A     MSESELENOMETHIONINE V - 212
1pgu_A_2091pgu   A     MSESELENOMETHIONINE F - 214
1pgu_A_2091pgu   A     MSESELENOMETHIONINE V - 222
1pgu_A_2091pgu   A     MSESELENOMETHIONINE T - 224

Clusters included in this Subclass
CLUSTER: HA.3.115
CLUSTER: HA.5.131