Logo
Information on SUBCLASS 4.6.2
Subclass Accession number: 6767
Subclass: 4.6.2 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 19.0 +/- 19.3
Average RMSD (Å) : 0.580 +/- 0.110

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hXDXpXXh
(φψ)-conformation: bbpaapbb
Pattern: x[CFV][AKMV][D]x[ds]x[iptv][FVY]x
Conservation:-1.000-0.114-0.4572.221-0.714-0.096-0.706-0.7060.574-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0i_*_2191a0i   -220228IVKDPMCIY.EEE-TT-EE.bxbxaaxxx.
1kws_A_1881kws   A191199YFADDDNTY.EE--TTSEE.bxbxaaxbb.
1lzj_A_2061lzj   A208216VCVDVDMEF.EEE-SSEEE.bbbxaabbx.
1o7q_A_2201o7q   A222230FCMDVDQVF.EEE-SSEEE.bbbxaabbx.
4kbp_A_3484kbp   A348356.VKDQSAPVY.EE-TTS-EE.bxbaaxxxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a0i_*_2191a0i   *     ATPADENOSINE-5'-TRIPHOSPHATE I - 220
1a0i_*_2191a0i   *     ATPADENOSINE-5'-TRIPHOSPHATE K - 222
1kws_A_1881kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID A - 193
1kws_A_1881kws   A     MNMANGANESE (II) ION D - 194
1kws_A_1881kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID D - 194
1kws_A_1881kws   A     MNMANGANESE (II) ION D - 195
1kws_A_1881kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID D - 195
1kws_A_1881kws   A     MNMANGANESE (II) ION D - 196
1kws_A_1881kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID D - 196
1kws_A_1881kws   A     MNMANGANESE (II) ION N - 197
1kws_A_1881kws   A     UGAURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID N - 197
1lzj_A_2061lzj   A     HGMERCURY (II) ION L - 207
1lzj_A_2061lzj   A     HGMERCURY (II) ION V - 208
1lzj_A_2061lzj   A     HGMERCURY (II) ION C - 209
1lzj_A_2061lzj   A     HGMERCURY (II) ION V - 210
1lzj_A_2061lzj   A     UDPURIDINE-5'-DIPHOSPHATE V - 210
1lzj_A_2061lzj   A     HGMERCURY (II) ION D - 211
1lzj_A_2061lzj   A     MNMANGANESE (II) ION D - 211
1lzj_A_2061lzj   A     UDPURIDINE-5'-DIPHOSPHATE D - 211
1lzj_A_2061lzj   A     MNMANGANESE (II) ION V - 212
1lzj_A_2061lzj   A     UDPURIDINE-5'-DIPHOSPHATE V - 212
1lzj_A_2061lzj   A     MNMANGANESE (II) ION D - 213
1lzj_A_2061lzj   A     UDPURIDINE-5'-DIPHOSPHATE D - 213
1lzj_A_2061lzj   A     MNMANGANESE (II) ION M - 214
1lzj_A_2061lzj   A     UDPURIDINE-5'-DIPHOSPHATE M - 214
1o7q_A_2201o7q   A     UDPURIDINE-5'-DIPHOSPHATE M - 224
1o7q_A_2201o7q   A     MNMANGANESE (II) ION D - 225
1o7q_A_2201o7q   A     GALD-GALACTOSE D - 225
1o7q_A_2201o7q   A     UDPURIDINE-5'-DIPHOSPHATE D - 225
1o7q_A_2201o7q   A     MNMANGANESE (II) ION V - 226
1o7q_A_2201o7q   A     UDPURIDINE-5'-DIPHOSPHATE V - 226
1o7q_A_2201o7q   A     MNMANGANESE (II) ION D - 227
1o7q_A_2201o7q   A     UDPURIDINE-5'-DIPHOSPHATE D - 227
1o7q_A_2201o7q   A     MNMANGANESE (II) ION Q - 228
1o7q_A_2201o7q   A     UDPURIDINE-5'-DIPHOSPHATE Q - 228
1o7q_A_2201o7q   A     GOLGLYCEROL V - 229
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1o7q_A_2201o7q   A AC3MN BINDING SITE FOR CHAIN AD - 225
1o7q_A_2201o7q   A AC3MN BINDING SITE FOR CHAIN AD - 227

Clusters included in this Subclass
CLUSTER: AR.4.60